R help - Nov 2011 - Correlation analysis

Hi everyone,

I am new to R-project. I did search through the list for my problem but i
can't find it. I am sorry if this question has been asked.

I would like to perform a correlation analysis between a hiv data and gene
expression.

Basically, i have a file that contains: hiv_name, start_position,
end_position, chromosome. I would like to see if these data has anything to
do with the location of our genes (I also have another file contains
gene_name, start_position, end_position, chromosome).

What functions that allow me to do this?

I am very new to R and hopefully someone can guide me to the right
direction.


Thank you very much,

	[[alternative HTML version deleted]]

I would start by reading one or more of the introduction manuals available
here:

http://mirrors.ibiblio.org/pub/mirrors/CRAN/








wizi wrote:
> 
> Hi everyone, 
> 
> I am new to R-project. I did search through the list for my problem but i
> can't find it. I am sorry if this question has been asked.
> 
> I would like to perform a correlation analysis between a hiv data and gene
> expression. 
> 
> Basically, i have a file that contains: hiv_name, start_position,
> end_position, chromosome. I would like to see if these data has anything
> to do with the location of our genes (I also have another file contains
> gene_name, start_position, end_position, chromosome).
> 
> What functions that allow me to do this?
> 
> I am very new to R and hopefully someone can guide me to the right
> direction. 
> 
> 
> Thank you very much,
> 

--
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Sent from the R help mailing list archive at Nabble.com.

You might find useful tools if you look at   Bioconductor as well. 

M

On Nov 6, 2011, at 4:58 PM, Minh Bui <buiduyminh at gmail.com> wrote:
> Hi everyone,
> 
> I am new to R-project. I did search through the list for my problem but i
> can't find it. I am sorry if this question has been asked.
> 
> I would like to perform a correlation analysis between a hiv data and gene
> expression.
> 
> Basically, i have a file that contains: hiv_name, start_position,
> end_position, chromosome. I would like to see if these data has anything to
> do with the location of our genes (I also have another file contains
> gene_name, start_position, end_position, chromosome).
> 
> What functions that allow me to do this?
> 
> I am very new to R and hopefully someone can guide me to the right
> direction.
> 
> 
> Thank you very much,
> 
>    [[alternative HTML version deleted]]
> 
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