Emmanuel Charpentier
2010-Oct-22 21:58 UTC
[R] Of possible interest for (Win|Open)BUGS users on Linux platforms
Dear list, It might be of interest to (Win|Open)BUGS users trying to use it from R on Linux platform, and to Linux R users trying to call (Win|Open)BUGS to note that two new packages have appeared on the OpenBUGS "User Conributed Code" (http://openbugs.info/w/UserContributedCode). R2OpenBUGS seems to be an adaptation of the R2WinBUGS package, able to run "native" OpenBUGS without Wine contorsions (of late, I have been unable to run WinBUGS from R2WinBUGS correctly without "debug" option, WinBUGS not opening the script file. Probably yet another wine regression...). A version of BRugs able to use the linux version of OpenBUGS is also avilable. Their author (apparently Chris Jackson from MRC Cambridge, which I thank heartily) states that "[p]ending additional user testing, they will be posted to CRAN". I add that such testing (and reporting !) might hasten this posting, an therefore the general availability of these packages. These packages might also be useful to stress-test the "other" BUGS implementation (JAGS), which gave me pause recently (in the "deviance/pD/DIC" department...). First data point : I have been able to install these two packages on Ubuntu Lucid (64 bits, using the g++-multilib package) and Debian Squeeze (32 bits) and to test BRugs quickly without apparent problems. HTH, Emmanuel Charpentier