HI, Dear R-community, I AM using the following codes to grow tree and plot tree: # Classification Tree with rpart library(rpart) pdf(file="/home/cdu/changbin/dimer_tree.pdf") # grow tree fit.dimer <- rpart(outcome ~ ., method="class", data=p.dimer[,2:402]) plotcp(fit.dimer) # visualize cross-validation results # plot tree plot(fit.dimer, uniform=TRUE, main="Classification Tree for AA.dimer") text(fit.dimer, use.n=TRUE, all=TRUE, cex=.8) dev.off() But when I open in the pdf file, I found the right side of tree is not shown up, also part of the bottom of the tree did not show. HOW TO DEAL WITH THIS PROBLEM? THanks! -- Sincerely, Changbin -- [[alternative HTML version deleted]]