Jiang, Yonghua
2010-Apr-22 19:20 UTC
[R] mixed model with subject-specific variance structure
Hi All, I built a mixed model with subject-specific variance structure in SAS and it works quite well. Now I intended to implement the same model in R using lme with "weights" option. Following is the SAS code and the corresponding R code: SAS: proc mixed data=source; class id trial group valence scan; model y=group|valence|scan; repeated /sub=id(trial) group=id type=AR(1); run; R vf1Ident<-varIdent(~1|id) vf1Ident.ini<-Initialize(vf1Ident,grouped.data) model<-lme(fixed=y~group*valence*scan,data=grouped.data,correlation=corAR1(),weights=vf1Ident.ini); The result shows :convergence error code = 1 message = iteration limit reached without convergence (9) I searched the help archive and likely the weights option does not work well. Any suggestion to implement the subject-specific variance structure in R? Thanks, Yonghua [[alternative HTML version deleted]]