R help - Feb 2010 - using setMethod or setGeneric to change S4 accessor symbol from @ to $

I created some S4 objects that are essentially data frame objects.  The S4
object definitions were necessary to verify data integrity and force a
standardized data format.  I am, however, finding myself redefining all the
typical generic functions so that I can still manipulate my S4 objects as if
they were data frames ... I have used setMethod to set methods for
"subset",
"head", and "tail".  I would like to use setMethod or
setGeneric to enable
me to use object$slotname to access object@slotname for my S4 objects.  Any
advice is appreciated.  Thanks.
--Markus

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On 02/07/2010 08:31 PM, Markus Weisner wrote:
> I created some S4 objects that are essentially data frame objects.  The S4
> object definitions were necessary to verify data integrity and force a
> standardized data format.  I am, however, finding myself redefining all the
> typical generic functions so that I can still manipulate my S4 objects as
if
> they were data frames ... I have used setMethod to set methods for
"subset",
> "head", and "tail".  I would like to use setMethod or
setGeneric to enable
> me to use object$slotname to access object at slotname for my S4 objects. 
Any
> advice is appreciated.  Thanks.
Hi Markus --
> setClass("A", representation(a="numeric"))
[1] "A"
> new("A")$a
Error in new("A")$a : $ operator not defined for this S4
class
> getGeneric("$")
standardGeneric for "$" defined from package "base"

function (x, name)
standardGeneric("$", .Primitive("$"))
<environment: 0xa62028>
Methods may be defined for arguments: x
Use  showMethods("$")  for currently available
ones.
> setMethod("$", "A", function(x, name) slot(x, name))
[1] "$"
> new("A", a=1:10)$a
 [1]  1  2  3  4  5  6  7  8  9 10
> new("A", a=1:10)$b
Error in slot(x, name) : no slot of name "b" for this object of class
"A"

does that help?

Martin
> --Markus
> 
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> 
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-- 
Martin Morgan
Computational Biology / Fred Hutchinson Cancer Research Center
1100 Fairview Ave. N.
PO Box 19024 Seattle, WA 98109

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