On 17.02.2010 08:46, anupam sinha wrote:> Dear all ,
> I am trying to install a package by name
'netmodels' keep
> on getting the following error :
>
>
>> install.packages("netmodels")
> Warning in install.packages("netmodels") :
> argument 'lib' is missing: using '/usr/lib64/R/library'
> also installing the dependency ?VGAM?
>
> trying URL
'http://cran.stat.ucla.edu/src/contrib/VGAM_0.7-10.tar.gz'
> Content type 'application/x-tar' length 1608488 bytes (1.5 Mb)
> opened URL
> =================================================> downloaded 1.5 Mb
>
> trying URL
'http://cran.stat.ucla.edu/src/contrib/netmodels_0.2.tar.gz'
> Content type 'application/x-tar' length 20049 bytes (19 Kb)
> opened URL
> =================================================> downloaded 19 Kb
>
> * Installing *source* package ?VGAM? ...
> ** libs
> gfortran -fpic -O2 -g -c cqof.f -o cqof.o
> gfortran: error trying to exec 'f951': execvp: No such file or
directory
> make: *** [cqof.o] Error 1
Your installation of the compilers seems to be broken.
You may also want to upgrade to a more recent version of R.
Uwe Ligges
> ERROR: compilation failed for package ?VGAM?
> * Removing ?/usr/lib64/R/library/VGAM?
> * Installing *source* package ?netmodels? ...
> ** R
> ** data
> ** preparing package for lazy loading
> Error : package 'VGAM' required by 'netmodels' could not be
found
> ERROR: lazy loading failed for package ?netmodels?
> * Removing ?/usr/lib64/R/library/netmodels?
>
> The downloaded packages are in
> ?/tmp/RtmpnUr2jb/downloaded_packages?
> Updating HTML index of packages in '.Library'
> Warning messages:
> 1: In install.packages("netmodels") :
> installation of package 'VGAM' had non-zero exit status
> 2: In install.packages("netmodels") :
> installation of package 'netmodels' had non-zero exit status
>
> Here's my sessionInfo(). Can anyone help me out with this ?
>
>
>> sessionInfo()
> R version 2.9.0 (2009-04-17)
> x86_64-redhat-linux-gnu
>
> locale:
>
LC_CTYPE=en_US.UTF-8;LC_NUMERIC=C;LC_TIME=en_US.UTF-8;LC_COLLATE=en_US.UTF-8;LC_MONETARY=C;LC_MESSAGES=en_US.UTF-8;LC_PAPER=en_US.UTF-8;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=en_US.UTF-8;LC_IDENTIFICATION=C
>
> attached base packages:
> [1] stats graphics grDevices utils datasets methods base
>
> loaded via a namespace (and not attached):
> [1] tcltk_2.9.0 tools_2.9.0
>> Detecting remotely related proteins by their
> Error: unexpected symbol in "Detecting remotely"
>> interactions and sequence similarity
> Error: unexpected symbol in "interactions and"
>
>
>
> Regards,
>
> Anupam Sinha
>
> [[alternative HTML version deleted]]
>
>
>
>
> ______________________________________________
> R-help at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide
http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.