R help - Jan 2010 - Lattice: How to color the data points in splom() according to the panel they are plotted?

Dear ExpeRts,

I have the scatter plot matrix as given below. I would like the different
"sub-plots" in the scatter plot matrix to be colored differently. How
do I get all points shown in the upper-left plot (on position (1,1) in the
scatter plot matrix) to be plotted in blue, and the points shown in the plot to
the right (on position (1,2) in the scatter plot matrix) to be plotted in red?
More generally, how can I provide a matrix of colors to be used by splom() such
that all data points in the corresponding sub-plot of the scatter plot matrix
are shown in the specified color?

Cheers,

Marius

Here is the code:

library(lattice)

entrymat=matrix(0,nrow=3,ncol=3)
entrymat[1,2]="black"
entrymat[1,3]="blue"
entrymat[2,3]="red"
entrymat=t(entrymat)

splom(~iris[,1:3],superpanel=function(z,...){
	mymat.df=data.frame(rows=as.vector(row(entrymat)),cols=as.vector(col(entrymat)),entries=as.vector(entrymat))
	mymat.df=subset(mymat.df,cols<rows)
		with(mymat.df,{
			panel.text(x=rows,y=cols,labels=entries)
		})
		panel.pairs(z,upper.panel=panel.splom,lower.panel=function(...){},...)
	},varnames=c("1","2","3")
)

Marius Hofert wrote:
> Dear ExpeRts,
> 
> I have the scatter plot matrix as given below. I would like the different
"sub-plots" in the scatter plot matrix to be colored differently. How
do I get all points shown in the upper-left plot (on position (1,1) in the
scatter plot matrix) to be plotted in blue, and the points shown in the plot to
the right (on position (1,2) in the scatter plot matrix) to be plotted in red?
More generally, how can I provide a matrix of colors to be used by splom() such
that all data points in the corresponding sub-plot of the scatter plot matrix
are shown in the specified color?
> 
> Cheers,
> 
> Marius
> 
> Here is the code:
> 
> library(lattice)
> 
> entrymat=matrix(0,nrow=3,ncol=3)
> entrymat[1,2]="black"
> entrymat[1,3]="blue"
> entrymat[2,3]="red"
> entrymat=t(entrymat)
> 
> splom(~iris[,1:3],superpanel=function(z,...){
> 
mymat.df=data.frame(rows=as.vector(row(entrymat)),cols=as.vector(col(entrymat)),entries=as.vector(entrymat))
> 	mymat.df=subset(mymat.df,cols<rows)
> 		with(mymat.df,{
> 			panel.text(x=rows,y=cols,labels=entries)
> 		})
> 		panel.pairs(z,upper.panel=panel.splom,lower.panel=function(...){},...)
> 	},varnames=c("1","2","3")
> )
I think that you will have to modify panel.pairs to get what
you want. But I must admit that I can't see why you would
want such a plot. What's achieved by having different
colours in different subpanels? And you would lose the
ability to colour groups differently (or things would become
really complicated and messy).

Attached is a modified panel.pairs function (but don't let
Deepayan see it; he'll probably be horrified by the
kludginess). Source the file and then try:

splom(~iris[1:3], superpanel = mypanel.pairs,
   clrmat = matrix(1:9,3,3))
splom(~iris[1:3], superpanel = mypanel.pairs,
   clrmat = matrix(c(NA,1,1,2,NA,4,2,6,NA),3,3))
theclrs <- matrix(c(NA,1,1,1,2,NA,3,3,2,4,NA,4,2,5,5,NA),4,4)
splom(~iris[1:4], superpanel = mypanel.pairs,
   clrmat = theclrs)

  -Peter Ehlers
> 
> ______________________________________________
> R-help at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide
http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
> 
> 
-- 
Peter Ehlers
University of Calgary
403.202.3921
-------------- next part --------------
An embedded and charset-unspecified text was scrubbed...
Name: mypanel_pairs.R
URL:
<https://stat.ethz.ch/pipermail/r-help/attachments/20100117/fbaff4f1/attachment.pl>