R help - Aug 2009 - Annotation database

Hi,

I have 15 CEL files of Affymetrix platform from GEO.

Title of experiment is : Ecoli_ASv2 Affymetrix E. coli Antisense Genome
Array.

I am looking for the package available in R for this array for annotation.

I  have already tried doing annotation from packages like org.EcK12.eg.db
but I don't got the success.

Is any other package in the form of database available for E.coli for
Annotation?

By
Sukhbir Singh Rattan

	[[alternative HTML version deleted]]

On Aug 29, 2009, at 2:43 AM, Sukhbir Rattan wrote:
> Hi,
>
> I have 15 CEL files of Affymetrix platform from GEO.
>
> Title of experiment is : Ecoli_ASv2 Affymetrix E. coli Antisense  
> Genome
> Array.
>
> I am looking for the package available in R for this array for  
> annotation.
>
> I  have already tried doing annotation from packages like  
> org.EcK12.eg.db
> but I don't got the success.
>
> Is any other package in the form of database available for E.coli for
> Annotation?
You're probably on the wrong mailing list, but see if these help:

http://article.gmane.org/gmane.science.biology.informatics.conductor/20614

http://www.bioconductor.org/data/cdfenvs/repos/html/ecoliasv2cdfv1.4.3.html

-- 

David Winsemius, MD
Heritage Laboratories
West Hartford, CT