Brandon.J.Whitcher at gsk.com
2009-Apr-01 14:51 UTC
[R] smv() in "e1071" and the BreastCancer data from "mlbench"
R-help, I am trying to perform a basic anlaysis of the BreastCancer data from "mlbench" using the svm() function in "e1071". I use the following code library("e1071") library("mlbench") data(BreastCancer) BC <- subset(BreastCancer, select=-Id) pairs(BC) model <- svm(Class ~ ., data=BC, cross=10) ## plot(model, BC, ) tobj <- tune.svm(Class ~ ., data=BC, gamma=seq(0.0001,0.2,length=3), cost=seq(10,100,length=3)) ...And here are the results from my session (with contextual information)> system("uname -a")Linux hmhuw015 2.6.9-34.ELsmp #1 SMP Fri Feb 24 16:56:28 EST 2006 x86_64 x86_64 x86_64 GNU/Linux> version_ platform x86_64-unknown-linux-gnu arch x86_64 os linux-gnu system x86_64, linux-gnu status major 2 minor 8.1 year 2008 month 12 day 22 svn rev 47281 language R version.string R version 2.8.1 (2008-12-22)> tobj <- tune.svm(Class ~ ., data=BC, gamma=seq(0.0001,0.2,length=3),+ cost=seq(1,100,length=3)) Error in names(ret2) <- rowns : 'names' attribute [70] must be the same length as the vector [68] Sorry, but could someone tell me what the error is trying to get at? thanks, Brandon ----------------------------------------------------------- This e-mail was sent by GlaxoSmithKline Services Unlimited (registered in England and Wales No. 1047315), which is a member of the GlaxoSmithKline group of companies. The registered address of GlaxoSmithKline Services Unlimited is 980 Great West Road, Brentford, Middlesex TW8 9GS. ----------------------------------------------------------- [[alternative HTML version deleted]]