Peter Waltman
2009-Jan-27 00:30 UTC
[R] Running R under Sun Grid Engine with OpenMPI tight integration
Hi - I saw your posting on the R-help mailing list. Were you ever able to get this working? did you end up switching to use the rsge library? I'm trying to do the same, and not having very much luck getting it going. Thanks! Peter Waltman [[alternative HTML version deleted]]
Rainer M Krug
2009-Jan-27 06:33 UTC
[R] Running R under Sun Grid Engine with OpenMPI tight integration
On Tue, Jan 27, 2009 at 2:30 AM, Peter Waltman <peter.waltman at gmail.com> wrote:> Hi - > > I saw your posting on the R-help mailing list. Were you ever able to get > this working? did you end up switching to use the rsge library?Yes - that is exactly what I did - I am using rsge or, which is in most cases sufficient for me, starting several instances of R and run the whole simulation (array processing). But I would still like to know how I can use the Rmpi and snow on the Sun Grid Engine. Please keep me posted, Rainer> > I'm trying to do the same, and not having very much luck getting it going. > > Thanks! > > Peter Waltman >-- Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation Biology, UCT), Dipl. Phys. (Germany) Centre of Excellence for Invasion Biology Faculty of Science Natural Sciences Building Private Bag X1 University of Stellenbosch Matieland 7602 South Africa
Possibly Parallel Threads
- Running R under Sun Grid Engine with OpenMPI tight integration
- Using the Sun Grid Engine with R-3.0
- problem with putting objects in list
- Problem with R on dual core under Linux - can not execute mpi.spawn.Rslaves()
- bug in readRAST6 function in package spgrass6