Dear all:
I attached the dataset with this email and post codes as below.
My questions is related to the 'col=temp.col' for the line and pch in my
code, I have 4 IDs, 10 DIDs and each ID include different DIDs, for example,
first ID has 3 DIDs, then the color is the first three colors(black, red, green)
in the first plot, but in the second plot, why the color change to pink which is
6th one, I actually expect the color is blue which is the 4th one, same problems
for the rest of plots. I am confused about the mechnism of picking color in R
based on my code, how can I specify the color I want in this situation and code.
Basically, I would like to have 10 different colors of line and pch(line and pch
will be in same color) for each combination of ID and DID. I expected first 10
colors in R for this plot initially.
I appreciate your instructions.
dogpbmc=read.table('E:\\MPI\\4924\\PBMC-PKPD\\mpbmc.tab', skip=1,
header=T)
dogpbmc=dogpbmc[dogpbmc$MDV!=1,]
par(mfrow=c(2,2),mar=c(5,5,4,4))
# E vs t for simultaneous modeling
temp.col=0
for (i in unique(dogpbmc$ID)){
j=dogpbmc$ID==i
plot(dogpbmc$TIME[j], dogpbmc$DV[j], type='n',
xlim=c(0,max(dogpbmc$TIME[j&dogpbmc$CMT==4])+1),
ylim=c(0,250),xlab='Time (hr)', ylab='PD', cex=0.9)
for (k in unique(dogpbmc$DID)){
m=dogpbmc$DID==k
temp.col=temp.col+1
#points(dogpbmc$TIME[j&dogpbmc$CMT==4, dogpbmc$PRED[j&dogpbmc$CMT==4],
type='l', col=2,lwd=3,lty=1,cex=0.9)
points(dogpbmc$TIME[j&m],dogpbmc$DV[j&m], type='p',
col=temp.col, pch=16, lwd=3,lty=1,cex=0.9)
points(dogpbmc$TIME[j&m],dogpbmc$IPRE[j&m], type='l',
col=temp.col,lwd=3,lty=1,cex=0.9)
title(paste('ID #',i,sep=''))
}
}
Zheng
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TABLE NO. 1
ID DID TIME Y EVID MDV
CMT IPRE DV PRED RES WRES
5.0000E+00 1.0000E+00 0.0000E+00 1.1166E+02 1.0000E+00 1.0000E+00
4.0000E+00 0.0000E+00 0.0000E+00 1.1166E+02 0.0000E+00 0.0000E+00
5.0000E+00 1.0000E+00 0.0000E+00 1.1166E+02 1.0000E+00 1.0000E+00
1.0000E+00 0.0000E+00 0.0000E+00 1.1166E+02 0.0000E+00 0.0000E+00
5.0000E+00 1.0000E+00 0.0000E+00 1.1166E+02 0.0000E+00 0.0000E+00
4.0000E+00 1.1166E+02 7.8850E+01 1.1166E+02 -3.2806E+01 -6.7720E-01
5.0000E+00 1.0000E+00 0.0000E+00 1.1166E+02 0.0000E+00 0.0000E+00
4.0000E+00 1.1166E+02 1.0840E+02 1.1166E+02 -3.2556E+00 -6.7205E-02
5.0000E+00 1.0000E+00 0.0000E+00 1.1166E+02 0.0000E+00 0.0000E+00
4.0000E+00 1.1166E+02 1.1273E+02 1.1166E+02 1.0744E+00 2.2178E-02
5.0000E+00 1.0000E+00 5.0000E-01 1.9009E+01 0.0000E+00 0.0000E+00
4.0000E+00 1.9009E+01 2.4130E+01 3.4494E+01 -1.0364E+01 6.0315E-02
5.0000E+00 1.0000E+00 5.0000E-01 1.9009E+01 0.0000E+00 0.0000E+00
4.0000E+00 1.9009E+01 2.8860E+01 3.4494E+01 -5.6340E+00 3.7637E-01
5.0000E+00 1.0000E+00 5.0000E-01 1.9009E+01 0.0000E+00 0.0000E+00
4.0000E+00 1.9009E+01 2.9340E+01 3.4494E+01 -5.1540E+00 4.0845E-01
5.0000E+00 1.0000E+00 1.0000E+00 3.0556E+01 0.0000E+00 0.0000E+00
4.0000E+00 3.0556E+01 2.0630E+01 4.2776E+01 -2.2146E+01 -8.5963E-01
5.0000E+00 1.0000E+00 1.0000E+00 3.0556E+01 0.0000E+00 0.0000E+00
4.0000E+00 3.0556E+01 2.0690E+01 4.2776E+01 -2.2086E+01 -8.5639E-01
5.0000E+00 1.0000E+00 2.0000E+00 6.5281E+01 0.0000E+00 0.0000E+00
4.0000E+00 6.5281E+01 1.0266E+02 6.3106E+01 3.9554E+01 1.2369E+00
5.0000E+00 1.0000E+00 2.0000E+00 6.5281E+01 0.0000E+00 0.0000E+00
4.0000E+00 6.5281E+01 7.5430E+01 6.3106E+01 1.2324E+01 2.4235E-01
5.0000E+00 1.0000E+00 2.0000E+00 6.5281E+01 0.0000E+00 0.0000E+00
4.0000E+00 6.5281E+01 2.1432E+02 6.3106E+01 1.5121E+02 5.3152E+00
5.0000E+00 1.0000E+00 4.0000E+00 1.0611E+02 0.0000E+00 0.0000E+00
4.0000E+00 1.0611E+02 1.2050E+02 9.4971E+01 2.5529E+01 2.9548E-01
5.0000E+00 1.0000E+00 4.0000E+00 1.0611E+02 0.0000E+00 0.0000E+00
4.0000E+00 1.0611E+02 1.3167E+02 9.4971E+01 3.6699E+01 5.6657E-01
5.0000E+00 1.0000E+00 8.0000E+00 1.1146E+02 0.0000E+00 0.0000E+00
4.0000E+00 1.1146E+02 5.1100E+01 1.1057E+02 -5.9471E+01 -1.2881E+00
5.0000E+00 1.0000E+00 8.0000E+00 1.1146E+02 0.0000E+00 0.0000E+00
4.0000E+00 1.1146E+02 1.2913E+02 1.1057E+02 1.8559E+01 3.3847E-01
5.0000E+00 1.0000E+00 8.0000E+00 1.1146E+02 0.0000E+00 0.0000E+00
4.0000E+00 1.1146E+02 1.2341E+02 1.1057E+02 1.2839E+01 2.1923E-01
5.0000E+00 1.0000E+00 2.4000E+01 1.1161E+02 0.0000E+00 0.0000E+00
4.0000E+00 1.1161E+02 1.4031E+02 1.1163E+02 2.8676E+01 5.9197E-01
5.0000E+00 1.0000E+00 2.4000E+01 1.1161E+02 0.0000E+00 0.0000E+00
4.0000E+00 1.1161E+02 8.8570E+01 1.1163E+02 -2.3064E+01 -4.7629E-01
5.0000E+00 1.0000E+00 2.4000E+01 1.1161E+02 0.0000E+00 0.0000E+00
4.0000E+00 1.1161E+02 1.3479E+02 1.1163E+02 2.3156E+01 4.7800E-01
5.0000E+00 2.0000E+00 0.0000E+00 0.0000E+00 3.0000E+00 1.0000E+00
1.0000E+00 0.0000E+00 0.0000E+00 0.0000E+00 0.0000E+00 0.0000E+00
5.0000E+00 2.0000E+00 0.0000E+00 1.1166E+02 1.0000E+00 1.0000E+00
4.0000E+00 0.0000E+00 0.0000E+00 1.1166E+02 0.0000E+00 0.0000E+00
5.0000E+00 2.0000E+00 0.0000E+00 1.1166E+02 1.0000E+00 1.0000E+00
1.0000E+00 0.0000E+00 0.0000E+00 1.1166E+02 0.0000E+00 0.0000E+00
5.0000E+00 2.0000E+00 0.0000E+00 1.1166E+02 0.0000E+00 0.0000E+00
4.0000E+00 1.1166E+02 7.8850E+01 1.1166E+02 -3.2806E+01 -6.7720E-01
5.0000E+00 2.0000E+00 0.0000E+00 1.1166E+02 0.0000E+00 0.0000E+00
4.0000E+00 1.1166E+02 1.0840E+02 1.1166E+02 -3.2556E+00 -6.7205E-02
5.0000E+00 2.0000E+00 0.0000E+00 1.1166E+02 0.0000E+00 0.0000E+00
4.0000E+00 1.1166E+02 1.1273E+02 1.1166E+02 1.0744E+00 2.2178E-02
5.0000E+00 2.0000E+00 5.0000E-01 7.1485E+00 0.0000E+00 0.0000E+00
4.0000E+00 7.1485E+00 3.0600E+00 1.4481E+01 -1.1421E+01 -6.5636E-01
5.0000E+00 2.0000E+00 5.0000E-01 7.1485E+00 0.0000E+00 0.0000E+00
4.0000E+00 7.1485E+00 1.2100E+00 1.4481E+01 -1.3271E+01 -9.5082E-01
5.0000E+00 2.0000E+00 5.0000E-01 7.1485E+00 0.0000E+00 0.0000E+00
4.0000E+00 7.1485E+00 4.0800E+00 1.4481E+01 -1.0401E+01 -4.9401E-01
5.0000E+00 2.0000E+00 1.0000E+00 1.2463E+01 0.0000E+00 0.0000E+00
4.0000E+00 1.2463E+01 7.2000E+00 1.9152E+01 -1.1952E+01 -8.3807E-01
5.0000E+00 2.0000E+00 2.0000E+00 3.5676E+01 0.0000E+00 0.0000E+00
4.0000E+00 3.5676E+01 2.2160E+01 3.3758E+01 -1.1598E+01 -1.1020E+00
5.0000E+00 2.0000E+00 2.0000E+00 3.5676E+01 0.0000E+00 0.0000E+00
4.0000E+00 3.5676E+01 6.6050E+01 3.3758E+01 3.2292E+01 1.8946E+00
5.0000E+00 2.0000E+00 2.0000E+00 3.5676E+01 0.0000E+00 0.0000E+00
4.0000E+00 3.5676E+01 3.9390E+01 3.3758E+01 5.6320E+00 7.4383E-02
5.0000E+00 2.0000E+00 4.0000E+00 9.6522E+01 0.0000E+00 0.0000E+00
4.0000E+00 9.6522E+01 8.5360E+01 7.3122E+01 1.2238E+01 -4.0322E-01
5.0000E+00 2.0000E+00 4.0000E+00 9.6522E+01 0.0000E+00 0.0000E+00
4.0000E+00 9.6522E+01 9.8220E+01 7.3122E+01 2.5098E+01 2.1387E-03
5.0000E+00 2.0000E+00 8.0000E+00 1.1108E+02 0.0000E+00 0.0000E+00
4.0000E+00 1.1108E+02 9.3700E+01 1.0847E+02 -1.4765E+01 -4.5691E-01
5.0000E+00 2.0000E+00 8.0000E+00 1.1108E+02 0.0000E+00 0.0000E+00
4.0000E+00 1.1108E+02 1.4174E+02 1.0847E+02 3.3275E+01 5.6394E-01
5.0000E+00 2.0000E+00 2.4000E+01 1.1153E+02 0.0000E+00 0.0000E+00
4.0000E+00 1.1153E+02 1.2189E+02 1.1159E+02 1.0298E+01 2.1244E-01
5.0000E+00 3.0000E+00 0.0000E+00 0.0000E+00 3.0000E+00 1.0000E+00
1.0000E+00 0.0000E+00 0.0000E+00 0.0000E+00 0.0000E+00 0.0000E+00
5.0000E+00 3.0000E+00 0.0000E+00 1.1166E+02 1.0000E+00 1.0000E+00
4.0000E+00 0.0000E+00 0.0000E+00 1.1166E+02 0.0000E+00 0.0000E+00
5.0000E+00 3.0000E+00 0.0000E+00 1.1166E+02 1.0000E+00 1.0000E+00
1.0000E+00 0.0000E+00 0.0000E+00 1.1166E+02 0.0000E+00 0.0000E+00
5.0000E+00 3.0000E+00 0.0000E+00 1.1166E+02 0.0000E+00 0.0000E+00
4.0000E+00 1.1166E+02 7.8850E+01 1.1166E+02 -3.2806E+01 -6.7720E-01
5.0000E+00 3.0000E+00 0.0000E+00 1.1166E+02 0.0000E+00 0.0000E+00
4.0000E+00 1.1166E+02 1.0840E+02 1.1166E+02 -3.2556E+00 -6.7205E-02
5.0000E+00 3.0000E+00 0.0000E+00 1.1166E+02 0.0000E+00 0.0000E+00
4.0000E+00 1.1166E+02 1.1273E+02 1.1166E+02 1.0744E+00 2.2178E-02
5.0000E+00 3.0000E+00 5.0000E-01 3.6927E+00 0.0000E+00 0.0000E+00
4.0000E+00 3.6927E+00 1.5900E+00 7.7427E+00 -6.1527E+00 -4.5599E-01
5.0000E+00 3.0000E+00 5.0000E-01 3.6927E+00 0.0000E+00 0.0000E+00
4.0000E+00 3.6927E+00 2.2000E+00 7.7427E+00 -5.5427E+00 -2.7441E-01
5.0000E+00 3.0000E+00 5.0000E-01 3.6927E+00 0.0000E+00 0.0000E+00
4.0000E+00 3.6927E+00 1.8000E+00 7.7427E+00 -5.9427E+00 -3.9348E-01
5.0000E+00 3.0000E+00 1.0000E+00 6.6004E+00 0.0000E+00 0.0000E+00
4.0000E+00 6.6004E+00 2.1200E+00 1.0475E+01 -8.3549E+00 -1.0657E+00
5.0000E+00 3.0000E+00 1.0000E+00 6.6004E+00 0.0000E+00 0.0000E+00
4.0000E+00 6.6004E+00 2.2400E+00 1.0475E+01 -8.2349E+00 -1.0393E+00
5.0000E+00 3.0000E+00 2.0000E+00 2.1235E+01 0.0000E+00 0.0000E+00
4.0000E+00 2.1235E+01 1.2920E+01 1.9887E+01 -6.9666E+00 -1.1259E+00
5.0000E+00 3.0000E+00 2.0000E+00 2.1235E+01 0.0000E+00 0.0000E+00
4.0000E+00 2.1235E+01 5.5300E+00 1.9887E+01 -1.4357E+01 -1.9825E+00
5.0000E+00 3.0000E+00 2.0000E+00 2.1235E+01 0.0000E+00 0.0000E+00
4.0000E+00 2.1235E+01 7.4800E+00 1.9887E+01 -1.2407E+01 -1.7564E+00
5.0000E+00 3.0000E+00 4.0000E+00 8.5007E+01 0.0000E+00 0.0000E+00
4.0000E+00 8.5007E+01 5.2380E+01 5.4365E+01 -1.9851E+00 -1.3121E+00
5.0000E+00 3.0000E+00 4.0000E+00 8.5007E+01 0.0000E+00 0.0000E+00
4.0000E+00 8.5007E+01 1.1600E+02 5.4365E+01 6.1635E+01 1.3851E+00
5.0000E+00 3.0000E+00 4.0000E+00 8.5007E+01 0.0000E+00 0.0000E+00
4.0000E+00 8.5007E+01 8.2740E+01 5.4365E+01 2.8375E+01 -2.4983E-02
5.0000E+00 3.0000E+00 8.0000E+00 1.1052E+02 0.0000E+00 0.0000E+00
4.0000E+00 1.1052E+02 1.1424E+02 1.0545E+02 8.7879E+00 -8.8358E-02
5.0000E+00 3.0000E+00 8.0000E+00 1.1052E+02 0.0000E+00 0.0000E+00
4.0000E+00 1.1052E+02 1.4427E+02 1.0545E+02 3.8818E+01 5.6801E-01
5.0000E+00 3.0000E+00 8.0000E+00 1.1052E+02 0.0000E+00 0.0000E+00
4.0000E+00 1.1052E+02 1.1458E+02 1.0545E+02 9.1279E+00 -8.0927E-02
5.0000E+00 3.0000E+00 2.4000E+01 1.1141E+02 0.0000E+00 0.0000E+00
4.0000E+00 1.1141E+02 1.8111E+02 1.1153E+02 6.9582E+01 1.4375E+00
5.0000E+00 3.0000E+00 2.4000E+01 1.1141E+02 0.0000E+00 0.0000E+00
4.0000E+00 1.1141E+02 1.2632E+02 1.1153E+02 1.4792E+01 3.0517E-01
1.6000E+01 4.0000E+00 0.0000E+00 1.1166E+02 1.0000E+00 1.0000E+00
4.0000E+00 0.0000E+00 0.0000E+00 1.1166E+02 0.0000E+00 0.0000E+00
1.6000E+01 4.0000E+00 0.0000E+00 1.1166E+02 1.0000E+00 1.0000E+00
1.0000E+00 0.0000E+00 0.0000E+00 1.1166E+02 0.0000E+00 0.0000E+00
1.6000E+01 4.0000E+00 0.0000E+00 1.1166E+02 0.0000E+00 0.0000E+00
4.0000E+00 1.1166E+02 1.2771E+02 1.1166E+02 1.6051E+01 3.3135E-01
1.6000E+01 4.0000E+00 0.0000E+00 1.1166E+02 0.0000E+00 0.0000E+00
4.0000E+00 1.1166E+02 4.1121E+01 1.1166E+02 -7.0535E+01 -1.4560E+00
1.6000E+01 4.0000E+00 0.0000E+00 1.1166E+02 0.0000E+00 0.0000E+00
4.0000E+00 1.1166E+02 1.4136E+02 1.1166E+02 2.9703E+01 6.1316E-01
1.6000E+01 4.0000E+00 0.0000E+00 1.1166E+02 0.0000E+00 0.0000E+00
4.0000E+00 1.1166E+02 8.9813E+01 1.1166E+02 -2.1843E+01 -4.5090E-01
1.6000E+01 4.0000E+00 1.0000E+00 1.5295E+01 0.0000E+00 0.0000E+00
4.0000E+00 1.5295E+01 8.6876E+00 1.9272E+01 -1.0584E+01 -9.6273E-01
1.6000E+01 4.0000E+00 1.0000E+00 1.5295E+01 0.0000E+00 0.0000E+00
4.0000E+00 1.5295E+01 1.2949E+01 1.9272E+01 -6.3229E+00 -4.5311E-01
1.6000E+01 4.0000E+00 1.0000E+00 1.5295E+01 0.0000E+00 0.0000E+00
4.0000E+00 1.5295E+01 1.3611E+01 1.9272E+01 -5.6610E+00 -3.7394E-01
1.6000E+01 4.0000E+00 1.0000E+00 1.5295E+01 0.0000E+00 0.0000E+00
4.0000E+00 1.5295E+01 5.2953E+00 1.9272E+01 -1.3976E+01 -1.3684E+00
1.6000E+01 4.0000E+00 2.0000E+00 2.7598E+01 0.0000E+00 0.0000E+00
4.0000E+00 2.7598E+01 1.6424E+01 3.4151E+01 -1.7728E+01 -8.8711E-01
1.6000E+01 4.0000E+00 2.0000E+00 2.7598E+01 0.0000E+00 0.0000E+00
4.0000E+00 2.7598E+01 3.0158E+01 3.4151E+01 -3.9930E+00 3.9841E-02
1.6000E+01 4.0000E+00 2.0000E+00 2.7598E+01 0.0000E+00 0.0000E+00
4.0000E+00 2.7598E+01 3.2309E+01 3.4151E+01 -1.8418E+00 1.8503E-01
1.6000E+01 4.0000E+00 2.0000E+00 2.7598E+01 0.0000E+00 0.0000E+00
4.0000E+00 2.7598E+01 3.4088E+01 3.4151E+01 -6.2941E-02 3.0508E-01
1.6000E+01 4.0000E+00 4.0000E+00 6.5180E+01 0.0000E+00 0.0000E+00
4.0000E+00 6.5180E+01 7.5168E+01 7.3995E+01 1.1728E+00 3.0804E-01
1.6000E+01 4.0000E+00 4.0000E+00 6.5180E+01 0.0000E+00 0.0000E+00
4.0000E+00 6.5180E+01 7.6285E+01 7.3995E+01 2.2898E+00 3.4283E-01
1.6000E+01 4.0000E+00 4.0000E+00 6.5180E+01 0.0000E+00 0.0000E+00
4.0000E+00 6.5180E+01 3.5495E+01 7.3995E+01 -3.8500E+01 -9.2774E-01
1.6000E+01 4.0000E+00 4.0000E+00 6.5180E+01 0.0000E+00 0.0000E+00
4.0000E+00 6.5180E+01 7.4589E+01 7.3995E+01 5.9364E-01 2.9000E-01
1.6000E+01 4.0000E+00 8.0000E+00 1.0709E+02 0.0000E+00 0.0000E+00
4.0000E+00 1.0709E+02 9.3246E+01 1.0866E+02 -1.5418E+01 -2.8479E-01
1.6000E+01 4.0000E+00 8.0000E+00 1.0709E+02 0.0000E+00 0.0000E+00
4.0000E+00 1.0709E+02 5.2539E+01 1.0866E+02 -5.6126E+01 -1.1482E+00
1.6000E+01 4.0000E+00 8.0000E+00 1.0709E+02 0.0000E+00 0.0000E+00
4.0000E+00 1.0709E+02 9.3495E+01 1.0866E+02 -1.5170E+01 -2.7952E-01
1.6000E+01 4.0000E+00 8.0000E+00 1.0709E+02 0.0000E+00 0.0000E+00
4.0000E+00 1.0709E+02 2.9372E+01 1.0866E+02 -7.9293E+01 -1.6396E+00
1.6000E+01 4.0000E+00 2.4000E+01 1.1154E+02 0.0000E+00 0.0000E+00
4.0000E+00 1.1154E+02 1.5824E+02 1.1159E+02 4.6644E+01 9.6366E-01
1.6000E+01 4.0000E+00 2.4000E+01 1.1154E+02 0.0000E+00 0.0000E+00
4.0000E+00 1.1154E+02 1.7168E+02 1.1159E+02 6.0089E+01 1.2414E+00
1.6000E+01 4.0000E+00 2.4000E+01 1.1154E+02 0.0000E+00 0.0000E+00
4.0000E+00 1.1154E+02 2.4602E+02 1.1159E+02 1.3443E+02 2.7768E+00
1.6000E+01 4.0000E+00 2.4000E+01 1.1154E+02 0.0000E+00 0.0000E+00
4.0000E+00 1.1154E+02 1.0367E+02 1.1159E+02 -7.9218E+00 -1.6336E-01
1.8000E+01 5.0000E+00 0.0000E+00 0.0000E+00 1.0000E+00 1.0000E+00
1.0000E+00 0.0000E+00 0.0000E+00 0.0000E+00 0.0000E+00 0.0000E+00
1.8000E+01 5.0000E+00 0.0000E+00 1.1166E+02 1.0000E+00 1.0000E+00
4.0000E+00 0.0000E+00 0.0000E+00 1.1166E+02 0.0000E+00 0.0000E+00
1.8000E+01 5.0000E+00 0.0000E+00 1.1166E+02 0.0000E+00 0.0000E+00
4.0000E+00 1.1166E+02 1.6966E+02 1.1166E+02 5.8004E+01 1.1974E+00
1.8000E+01 5.0000E+00 0.0000E+00 1.1166E+02 0.0000E+00 0.0000E+00
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4.0000E+00 1.0155E+02 1.2262E+02 9.5755E+01 2.6869E+01 5.5386E-01
2.0000E+01 1.0000E+01 7.2000E+01 1.0155E+02 0.0000E+00 0.0000E+00
4.0000E+00 1.0155E+02 1.1697E+02 9.5755E+01 2.1213E+01 4.1771E-01
2.0000E+01 1.0000E+01 7.2000E+01 1.0155E+02 0.0000E+00 0.0000E+00
4.0000E+00 1.0155E+02 1.1642E+02 9.5755E+01 2.0663E+01 4.0448E-01
