Dear R-help, I'm doing conditional logit regression for a discrete choice model. I want to know whether there's a way to get the fitted probabilities. In Stata, "predict" works for clogit, but it seems that in R "predict" does not. Thank you very much! Best wishes. Sincerely, Min -- Min Chen Graduate Student Department of Agricultural, Food and Resource Economics Michigan State University [[alternative HTML version deleted]]
Gavin Simpson
2008-Sep-05 10:44 UTC
[R] Fitted probabilities in conditional logit regression
On Sun, 2008-08-31 at 09:49 -0400, Min Chen wrote:> Dear R-help, > > I'm doing conditional logit regression for a discrete choice model. > I want to know whether there's a way to get the fitted probabilities. In > Stata, "predict" works for clogit, but it seems that in R "predict" does > not. > > Thank you very much! > > Best wishes.Can you explain/demonstrate how/why "predict" doesn't work for clogit? I can get predictions from a clogit model: ## from ?clogit mod <- clogit(case~spontaneous+induced+strata(stratum),data=infert) predict(mod) predict(mod, type = "expected") all work for that example to give the "fitted" values. See ?predict.coxph for details of the predict function. I'm not familiar with either the code or the methods, but 'type = "expected"' seems to give what you want. HTH G -- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL Geography, [f] +44 (0)20 7679 0565 Pearson Building, [e] gavin.simpsonATNOSPAMucl.ac.uk Gower Street, London [w] http://www.ucl.ac.uk/~ucfagls/ UK. WC1E 6BT. [w] http://www.freshwaters.org.uk %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%