Hi All, I am trying to make R package using R 2.6.2 And I am getting following error. When I give R CMD check t1\ ---------- Making package t1 ------------ adding build stamp to DESCRIPTION making DLL ... making CGHseg_rewrite.d from CGHseg_rewrite.c making rowMedians.d from rowMedians.c making runavg.d from runavg.c gcc-sjlj -std=gnu99 -Ic:/R/R-2.6.2/include -O3 -Wall -c CGHseg_rewrite.c -o CGHseg_rewrite.o gcc-sjlj -std=gnu99 -Ic:/R/R-2.6.2/include -O3 -Wall -c rowMedians.c -o rowMedians.o gcc-sjlj -std=gnu99 -Ic:/R/R-2.6.2/include -O3 -Wall -c runavg.c -o runavg.o windres --preprocessor="gcc-sjlj -E -xc -DRC_INVOKED" -I c:/R/R-2.6.2/include -i t1_res.rc -o t1_res.o gcc-sjlj -std=gnu99 -shared -s -o t1.dll t1.def CGHseg_rewrite.o rowMedians.o runavg.o t1_res.o -Lc:/R/R-2.6.2/bin -lR ... DLL made installing DLL installing R files installing data files rm: failed to get attributes of `/': No such file or directory make[2]: *** [C:/Vidhu/CGH/RPackage/t1.Rcheck/t1/data] Error 1 make[1]: *** [all] Error 2 make: *** [pkg-t1] Error 2 *** Installation of t1 failed *** Can you please suggest what could be the probable cause of the error Thank you Vidhu [[alternative HTML version deleted]]
No idea, can you make the package available for us (after R CMD build)? Uwe Ligges Vidhu Choudhary wrote:> Hi All, > I am trying to make R package using R 2.6.2 > And I am getting following error. > > When I give R CMD check t1\ > > ---------- Making package t1 ------------ > adding build stamp to DESCRIPTION > making DLL ... > making CGHseg_rewrite.d from CGHseg_rewrite.c > making rowMedians.d from rowMedians.c > making runavg.d from runavg.c > gcc-sjlj -std=gnu99 -Ic:/R/R-2.6.2/include -O3 -Wall -c > CGHseg_rewrite.c -o CGHseg_rewrite.o > gcc-sjlj -std=gnu99 -Ic:/R/R-2.6.2/include -O3 -Wall -c rowMedians.c > -o rowMedians.o > gcc-sjlj -std=gnu99 -Ic:/R/R-2.6.2/include -O3 -Wall -c runavg.c -o > runavg.o > windres --preprocessor="gcc-sjlj -E -xc -DRC_INVOKED" -I > c:/R/R-2.6.2/include -i t1_res.rc -o t1_res.o > gcc-sjlj -std=gnu99 -shared -s -o t1.dll t1.def CGHseg_rewrite.o > rowMedians.o runavg.o t1_res.o -Lc:/R/R-2.6.2/bin -lR > ... DLL made > installing DLL > installing R files > installing data files > rm: failed to get attributes of `/': No such file or directory > make[2]: *** [C:/Vidhu/CGH/RPackage/t1.Rcheck/t1/data] Error 1 > make[1]: *** [all] Error 2 > make: *** [pkg-t1] Error 2 > *** Installation of t1 failed *** > > > Can you please suggest what could be the probable cause of the error > > Thank you > Vidhu > > [[alternative HTML version deleted]] > > ______________________________________________ > R-help at r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code.
There isn't enough information there to really know but I would at least try this: - upgrade to R 2.7 - make sure you are using the most recent version of rtools from Duncan Murdoch's site - remove the data directory in your package since its the last thing referred to prior to the errors - if that still has a problem remove any vignettes too - if you still have a problem remove all non-R code On Thu, May 1, 2008 at 4:20 PM, Vidhu Choudhary <vidhu.choudhary at gmail.com> wrote:> Hi All, > I am trying to make R package using R 2.6.2 > And I am getting following error. > > When I give R CMD check t1\ > > ---------- Making package t1 ------------ > adding build stamp to DESCRIPTION > making DLL ... > making CGHseg_rewrite.d from CGHseg_rewrite.c > making rowMedians.d from rowMedians.c > making runavg.d from runavg.c > gcc-sjlj -std=gnu99 -Ic:/R/R-2.6.2/include -O3 -Wall -c > CGHseg_rewrite.c -o CGHseg_rewrite.o > gcc-sjlj -std=gnu99 -Ic:/R/R-2.6.2/include -O3 -Wall -c rowMedians.c > -o rowMedians.o > gcc-sjlj -std=gnu99 -Ic:/R/R-2.6.2/include -O3 -Wall -c runavg.c -o > runavg.o > windres --preprocessor="gcc-sjlj -E -xc -DRC_INVOKED" -I > c:/R/R-2.6.2/include -i t1_res.rc -o t1_res.o > gcc-sjlj -std=gnu99 -shared -s -o t1.dll t1.def CGHseg_rewrite.o > rowMedians.o runavg.o t1_res.o -Lc:/R/R-2.6.2/bin -lR > ... DLL made > installing DLL > installing R files > installing data files > rm: failed to get attributes of `/': No such file or directory > make[2]: *** [C:/Vidhu/CGH/RPackage/t1.Rcheck/t1/data] Error 1 > make[1]: *** [all] Error 2 > make: *** [pkg-t1] Error 2 > *** Installation of t1 failed *** > > > Can you please suggest what could be the probable cause of the error > > Thank you > Vidhu