Ingrid.Mage at matforsk.no
2008-Apr-29 13:32 UTC
[R] How do I specify a model with nested random terms?
Dear R-users,
I have problems specifying a model with nested random terms. I want to
reproduce a variance component model made in Mintab, the model
specification in Minitab is:
Response = Prod P Prod*P Sample(Prod P) Extract(Prod P Sample)
Random Prod Sample Extract
The dataset is balanced, and "P" is a fixed effect (treatment) while
"Prod", "Sample" and "Extract" are random effects.
"Sample" is nested under the "Prod*P" interaction, and
"Extract" is nested
under "Sample".
I tried using the lme function with the following formula specification:
lme(Response~Prod*P, Random=~1|Prod/P/Sample/Extract)
but the results do not look right. I don't understand how to specify the
"fixed" and "random" arguments correctly. Could someone
explain these
arguments to me? I have tried to read the help files and manuals but I
still don't get it :-S
Would it also be possible to use the aov function with Error() strata for
this problem?
Thank you and regards,
Ingrid Måge
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