Ingrid.Mage at matforsk.no
2008-Apr-29 13:32 UTC
[R] How do I specify a model with nested random terms?
Dear R-users, I have problems specifying a model with nested random terms. I want to reproduce a variance component model made in Mintab, the model specification in Minitab is: Response = Prod P Prod*P Sample(Prod P) Extract(Prod P Sample) Random Prod Sample Extract The dataset is balanced, and "P" is a fixed effect (treatment) while "Prod", "Sample" and "Extract" are random effects. "Sample" is nested under the "Prod*P" interaction, and "Extract" is nested under "Sample". I tried using the lme function with the following formula specification: lme(Response~Prod*P, Random=~1|Prod/P/Sample/Extract) but the results do not look right. I don't understand how to specify the "fixed" and "random" arguments correctly. Could someone explain these arguments to me? I have tried to read the help files and manuals but I still don't get it :-S Would it also be possible to use the aov function with Error() strata for this problem? Thank you and regards, Ingrid Måge [[alternative HTML version deleted]]