hi i am new to R language. I want to use aaMI package which calculates the amino acid mutual interaction for a given protein sequence. I had installed the package but when i run the program it gives me the error could not find function "aaMI". can anyone tell me what might be the problem.. -- View this message in context: http://www.nabble.com/aaMI-tp14915744p14915744.html Sent from the R help mailing list archive at Nabble.com.
> i am new to R language. I want to use aaMI package which calculates the > amino acid mutual interaction for a given protein sequence. I hadinstalled> the package but when i run the program it gives me the error could notfind> function "aaMI". can anyone tell me what might be the problem..Did you type library(aaMi) or require(aaMi) to load the package? Regards, Richie. Mathematical Sciences Unit HSL ------------------------------------------------------------------------ ATTENTION: This message contains privileged and confidential inform...{{dropped:20}}
Dear Richie. Thank you. yes it works after loading the package. can you please tell me what should be the location of the file during uploading for aaMI function. Richard Cotton wrote:> >> i am new to R language. I want to use aaMI package which calculates the >> amino acid mutual interaction for a given protein sequence. I had > installed >> the package but when i run the program it gives me the error could not > find >> function "aaMI". can anyone tell me what might be the problem.. > > Did you type library(aaMi) or require(aaMi) to load the package? > > Regards, > Richie. > > Mathematical Sciences Unit > HSL > > > ------------------------------------------------------------------------ > ATTENTION: > > This message contains privileged and confidential inform...{{dropped:20}} > > ______________________________________________ > R-help at r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide > http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. > >-- View this message in context: http://www.nabble.com/aaMI-tp14915744p14916040.html Sent from the R help mailing list archive at Nabble.com.
Hi Navish, did you run require(aaMI) ? Cheers Andrew On Thu, Jan 17, 2008 at 02:17:12AM -0800, navish wrote:> > hi > i am new to R language. I want to use aaMI package which calculates the > amino acid mutual interaction for a given protein sequence. I had installed > the package but when i run the program it gives me the error could not find > function "aaMI". can anyone tell me what might be the problem.. > -- > View this message in context: http://www.nabble.com/aaMI-tp14915744p14915744.html > Sent from the R help mailing list archive at Nabble.com. > > ______________________________________________ > R-help at r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. > > -- > This message has been scanned for viruses and > dangerous content by MailScanner, and is > believed to be clean.-- Andrew Robinson Department of Mathematics and Statistics Tel: +61-3-8344-9763 University of Melbourne, VIC 3010 Australia Fax: +61-3-8344-4599 http://www.ms.unimelb.edu.au/~andrewpr http://blogs.mbs.edu/fishing-in-the-bay/
> Thank you. yes it works after loading the package. can you please tellme> what should be the location of the file during uploading for aaMIfunction. You can use an absolute path to a file, e.g. "c:/source/project/myrproject/myfile.r" .. Or an relative path from the current working directory. The current working directory can be found using getwd() Then you can navigate to the directory where your file lies using standard folder navigation commands ('..' for parent directory, etc.), e.g. "../data directory/mydatafile.csv" You might also want to read the 'Introduction to R', and 'R data Import/ Export' manuals. http://cran.r-project.org/doc/manuals/R-intro.pdf http://cran.r-project.org/doc/manuals/R-data.pdf Regards, Richie. Mathematical Sciences Unit HSL ------------------------------------------------------------------------ ATTENTION: This message contains privileged and confidential inform...{{dropped:20}}