Please try to give a simple reproducible example and simplify your codes
a bit if you want to get useful responses.
For example, you say your data is a matrix of 1000*30, where I presume
the matrix has 1000 rows and 30 columns. If so EMP <- data[,378:392]
does not make sense.
Perhaps you might be interested in knn() in the class package.
Regards, Adai
tkobayas at indiana.edu wrote:> Rusers:
>
> I have tried to minimize computing times by taking advanage of
> lapply(). My data is a 1000*30 matrix and the distance matrix was
> created with dist(). What I am trying to do is to compute the standard
> distances using the frequencies attached to the nearest negibors of n
> reference zones. So I will have 1000 standard distances, and would like
> to see the frequency distribution of the standard distances.
>
> # Convert decimal degrees into UTM miles
> x<-(data[,1]-58277.194363)*0.000621
> y<-(data[,2]-4414486.03135)*0.000621
>
> # Combine x y for computing distances
> coords<-cbind(x,y)
> pts<-length(data)
>
> # Subset housing data and employment data
> RES<-data[,3:17]
> EMP<-data[,378:392]
>
> # Combine all the subdata as D
> D<-cbind(coords,RES,EMP)
>
> cases<-ncol(D)-ncol(coords)
>
> # Create a threshold bandwidth for defining the nearest neighbors
> thrs<-seq(0,35,by=1)
>
> SDTAZ<-rep(list(matrix(,nrow(D),length(thrs))),cases)
>
>
> for (j in 1:nrow(D))
> for (k in 1:length(thrs))
> for (l in 1:cases)
> {
> {
> {
>
> SDTAZ[[l]][j,k]<-
> sqrt(
> sum(
> (D[as.vector(which(dis[j,]<=thrs[k])),l+2]-D[j,l+2]-
> min(D[as.vector(which(dis[j,]<=thrs[k])),l+2]-D[j,l+2])+1)*
> (
> (dis[j,as.vector(which(dis[j,]<=thrs[k]))])^2
> )
> )
>
> /sum(D[as.vector(which(dis[j,]<=thrs[k])),l+2]-D[j,l+2]-
> min(D[as.vector(which(dis[j,]<=thrs[k])),l+2]-D[j,l+2])+1)
> )
> }
> }
> }
>
> I think that within this nested loop, I should use lapply() but I ended
> up getting different values.... I appreciate if someone could kindly
> help me.
>
> Thank you very much.
> ------------------------------------
> Takatsugu Kobayashi
> PhD Candidate
> Indiana University, Dept. Geography
>
> ______________________________________________
> R-help at stat.math.ethz.ch mailing list
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide
http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
>
>
>