Hi Everyone, I'm trying to use cutree to get the clusters after hclust. What I used is: mycluster<-cutree(cnclust,h=0.5) Now, my problem is, how can I get the actual clusters? Thanks! Best, Baoqiang Cao
On Sep 15, 2005, at 10:26 AM, Baoqiang Cao wrote:> Hi Everyone, > > I'm trying to use cutree to get the clusters after hclust. What I used > is: mycluster<-cutree(cnclust,h=0.5) > Now, my problem is, how can I get the actual clusters? Thanks! > > Best, > Baoqiang CaoDoesn't print(mycluster) give you the clusters? You could use something like: R> split(names(mycluster), mycluster) You may need to better define "get the actual clusters" to get a better answer. Stephen
Le 15.09.2005 17:26, Baoqiang Cao a ??crit :>Hi Everyone, > >I'm trying to use cutree to get the clusters after hclust. What I used is: mycluster<-cutree(cnclust,h=0.5) >Now, my problem is, how can I get the actual clusters? Thanks! > >Best, > Baoqiang Cao > >Hello, If you mean getting the labels in the same order than presented by the dendrogram (( Why isn't it the default BTW )), try using cutree.order in package A2R here http://addictedtor.free.fr/packages/A2R/ Regards, Romain -- visit the R Graph Gallery : http://addictedtor.free.fr/graphiques ~~~~~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~ ~~~~~~ Romain FRANCOIS - http://addictedtor.free.fr ~~~~~~ ~~~~ Etudiant ISUP - CS3 - Industrie et Services ~~~~ ~~ http://www.isup.cicrp.jussieu.fr/ ~~ ~~~~ Stagiaire INRIA Futurs - Equipe SELECT ~~~~ ~~~~~~ http://www.inria.fr/recherche/equipes/select.fr.html ~~~~~~ ~~~~~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~