Jan Verbesselt
2005-Mar-22 17:20 UTC
[R] Confidence interval for Tau-a or c-index to compare logistic lrm (binary) models with each other.
Dear R list, How can confidence interval be derived for e.g. the Tau-a coefficient or the c index (area under ROC curve) such that I can compare the fitted lrm (logistic) models with each other. Is this possible? The aim is to conclude that one model is significantly better than other model (a, b or c). y~a (continu)+ d(catergoric) y~b (continu)+ d(catergoric) y~c (continu)+ d(catergoric) I will look at residual deviance, the AIC, c-index en Tau-a to compare different logistic models (lrm Design package). All extra advice is mostly welcome! Regards, Jan _______________________________________________________________________ ir. Jan Verbesselt Research Associate Lab of Geomatics Engineering K.U. Leuven Vital Decosterstraat 102. B-3000 Leuven Belgium Tel: +32-16-329750 Fax: +32-16-329760 http://gloveg.kuleuven.ac.be/
Frank E Harrell Jr
2005-Mar-22 18:46 UTC
[R] Confidence interval for Tau-a or c-index to compare logistic lrm (binary) models with each other.
Jan Verbesselt wrote:> Dear R list, > > How can confidence interval be derived for e.g. the Tau-a coefficient or the > c index (area under ROC curve) such that I can compare the fitted lrm > (logistic) models with each other. Is this possible? > > The aim is to conclude that one model is significantly better than other > model (a, b or c). > > y~a (continu)+ d(catergoric) > y~b (continu)+ d(catergoric) > y~c (continu)+ d(catergoric) > > I will look at residual deviance, the AIC, c-index en Tau-a to compare > different logistic models (lrm Design package). All extra advice is mostly > welcome! > > Regards, > JanYou can only do this if you have an independent test dataset that was never used in model development or coefficient estimation. Given that, look at the rcorrp.cens function in Hmisc. Frank Harrell> > _______________________________________________________________________ > ir. Jan Verbesselt > Research Associate > Lab of Geomatics Engineering K.U. Leuven > Vital Decosterstraat 102. B-3000 Leuven Belgium > Tel: +32-16-329750 Fax: +32-16-329760 > http://gloveg.kuleuven.ac.be/ > > ______________________________________________ > R-help at stat.math.ethz.ch mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html >-- Frank E Harrell Jr Professor and Chair School of Medicine Department of Biostatistics Vanderbilt University