Thomas Schönhoff
2004-Sep-15 10:01 UTC
[R] loading error of the Rcmdr library on Debian Sid
Hello,
I just tried to get Rcmdr package working, resulting in:
----------------------------------------------------------------------
> library(Rcmdr)
Loading required package: tcltk
Loading required package: lattice
Loading required package: foreign
Loading required package: abind
Loading required package: lmtest
Loading required package: multcomp
Loading required package: relimp
Loading required package: effects
Loading required package: rgl
Error in dyn.load(x, as.logical(local), as.logical(now)) :
unable to load shared library
"/usr/lib/R/site-library/rgl/libs/rgl.so":
libnvidia-tls.so.1: cannot handle TLS data
Error in .C(symbol.C("rgl_quit"), success = FALSE, PACKAGE =
"rgl") :
C function name not in DLL for package rgl
Loading required package: mgcv
This is mgcv 1.1-1
Loading required package: car
Error: Missing packages: rgl
Error: .onLoad failed in loadNamespace
Error in library(Rcmdr) : package/namespace load failed
Missing rgl-package ?
-----------------------------------------------------------------------
thomas> dpkg -l |grep r-
r-cran-abind 1.1.0-1
r-cran-car 1.0.13-1
r-cran-foreign 0.7-1
r-cran-lattice 0.9.16-1
r-cran-mgcv 1.1.1.1-1
r-cran-rgl 0.64.13-1
r-cran-relimp 0.8.4-1
r-cran-rcmdr 0.9.11-1
r-cran-lmtest 0.9.6-2
r-cran-effects 1.0.5-1
r-cran-multcom 0.4.7-1
r-cran-mvtnorm 0.6.8-1
amongst other R related (basic and specific) packages.
Am I still missing some required packages to run RCommander smoothly?
My system:
Debian Sid (unstable)
GNU R 1.9.1
Xfree 4.3
Anyone else noticed this on Debian Sid whilst trying to run the R
Commander !? So far I didn't find a related bug report for Linux. Maybe
this is a Debian related problem, I really have no clue at the moment.
Regards
Thomas
Christian Schulz
2004-Sep-15 10:31 UTC
[R] loading error of the Rcmdr library on Debian Sid
Hi, it seems you have to install the rgl package and this demand the gl4 java lib what is necessary, too. http://www.jausoft.com/products/gl4java/gl4java_install.html christian Am Mittwoch, 15. September 2004 12:01 schrieb Thomas Sch??nhoff:> Hello, > > I just tried to get Rcmdr package working, resulting in: > > > ---------------------------------------------------------------------- > > > library(Rcmdr) > > Loading required package: tcltk > Loading required package: lattice > Loading required package: foreign > Loading required package: abind > Loading required package: lmtest > Loading required package: multcomp > Loading required package: relimp > Loading required package: effects > Loading required package: rgl > Error in dyn.load(x, as.logical(local), as.logical(now)) : > unable to load shared library > "/usr/lib/R/site-library/rgl/libs/rgl.so": > libnvidia-tls.so.1: cannot handle TLS data > Error in .C(symbol.C("rgl_quit"), success = FALSE, PACKAGE = "rgl") : > C function name not in DLL for package rgl > Loading required package: mgcv > This is mgcv 1.1-1 > Loading required package: car > Error: Missing packages: rgl > Error: .onLoad failed in loadNamespace > Error in library(Rcmdr) : package/namespace load failed > > Missing rgl-package ? > > > ----------------------------------------------------------------------- > > > thomas> dpkg -l |grep r- > > r-cran-abind 1.1.0-1 > r-cran-car 1.0.13-1 > r-cran-foreign 0.7-1 > r-cran-lattice 0.9.16-1 > r-cran-mgcv 1.1.1.1-1 > r-cran-rgl 0.64.13-1 > r-cran-relimp 0.8.4-1 > r-cran-rcmdr 0.9.11-1 > r-cran-lmtest 0.9.6-2 > r-cran-effects 1.0.5-1 > r-cran-multcom 0.4.7-1 > r-cran-mvtnorm 0.6.8-1 > > > amongst other R related (basic and specific) packages. > > > Am I still missing some required packages to run RCommander smoothly? > > > My system: > > Debian Sid (unstable) > GNU R 1.9.1 > Xfree 4.3 > > Anyone else noticed this on Debian Sid whilst trying to run the R > Commander !? So far I didn't find a related bug report for Linux. Maybe > this is a Debian related problem, I really have no clue at the moment. > > Regards > Thomas > > ______________________________________________ > R-help at stat.math.ethz.ch mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide! > http://www.R-project.org/posting-guide.html
Thomas Schönhoff
2004-Sep-15 11:07 UTC
[R] loading error of the Rcmdr library on Debian Sid
Hello Christian, Christian Schulz schrieb:>Hi, > >it seems you have to install the rgl package and this demand >the gl4 java lib what is necessary, too. > >http://www.jausoft.com/products/gl4java/gl4java_install.html > >Seems like that this dependency is missing in the r-cran-rgl package!? So I am going to write a bug report to the debian maintainer! Thanks Thomas
You can apt-get RGL in sid. Thomas Sch??nhoff <tom_woody at web.de> writes:> Hello, > > I just tried to get Rcmdr package working, resulting in: > > > ---------------------------------------------------------------------- > > library(Rcmdr) > Loading required package: tcltk > Loading required package: lattice > Loading required package: foreign > Loading required package: abind > Loading required package: lmtest > Loading required package: multcomp > Loading required package: relimp > Loading required package: effects > Loading required package: rgl > Error in dyn.load(x, as.logical(local), as.logical(now)) : > unable to load shared library > "/usr/lib/R/site-library/rgl/libs/rgl.so": > libnvidia-tls.so.1: cannot handle TLS data > Error in .C(symbol.C("rgl_quit"), success = FALSE, PACKAGE = "rgl") : > C function name not in DLL for package rgl > Loading required package: mgcv > This is mgcv 1.1-1 > Loading required package: car > Error: Missing packages: rgl > Error: .onLoad failed in loadNamespace > Error in library(Rcmdr) : package/namespace load failed > > Missing rgl-package ? > > > ----------------------------------------------------------------------- > > > thomas> dpkg -l |grep r- > > r-cran-abind 1.1.0-1 > r-cran-car 1.0.13-1 > r-cran-foreign 0.7-1 > r-cran-lattice 0.9.16-1 > r-cran-mgcv 1.1.1.1-1 > r-cran-rgl 0.64.13-1 > r-cran-relimp 0.8.4-1 > r-cran-rcmdr 0.9.11-1 > r-cran-lmtest 0.9.6-2 > r-cran-effects 1.0.5-1 > r-cran-multcom 0.4.7-1 > r-cran-mvtnorm 0.6.8-1 > > > amongst other R related (basic and specific) packages. > > > Am I still missing some required packages to run RCommander smoothly? > > > My system: > > Debian Sid (unstable) > GNU R 1.9.1 > Xfree 4.3 > > Anyone else noticed this on Debian Sid whilst trying to run the R > Commander !? So far I didn't find a related bug report for > Linux. Maybe this is a Debian related problem, I really have no clue > at the moment. > > Regards > Thomas > > ______________________________________________ > R-help at stat.math.ethz.ch mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html >-- Anthony Rossini Research Associate Professor rossini at u.washington.edu http://www.analytics.washington.edu/ Biomedical and Health Informatics University of Washington Biostatistics, SCHARP/HVTN Fred Hutchinson Cancer Research Center UW (Tu/Th/F): 206-616-7630 FAX=206-543-3461 | Voicemail is unreliable FHCRC (M/W): 206-667-7025 FAX=206-667-4812 | use Email CONFIDENTIALITY NOTICE: This e-mail message and any attachme...{{dropped}}