I run R 1.9.0 on windows 2000, and have the following libraries installed: affydata_1.3.1 affy_1.4.23 Biobase_1.4.10 DynDoc_1.3.14 gcrma_1.0.6 hgu133acdf_1.4.3 hgu95av2cdf_1.4.3 hgu95av2probe_1.0 matchprobes_1.0.7 moe430acdf_1.4.3 multcomp_0.4-6 mvtnorm_0.6-6 rae230acdf_1.4.3 reposTools_1.3.29 rgu34acdf_1.4.3 tkWidgets_1.5.1 widgetTools_1.2.7 1. The rma function (in affy library) always crashes. 2. When executing the sample code in gcrma function's document, the following error occures: Loading required package: matchprobes Error in f(libname, pkgname) : couldn't find function "addVigs2WinMenu" Does any one known any quick fix or workaround? James [[alternative HTML version deleted]]
This is a bioconductor issue, and better suited for that list. "Li, James [PRDUS Non-J&J]" <JLi2 at prdus.jnj.com> writes:> I run R 1.9.0 on windows 2000, and have the following libraries installed: > > affydata_1.3.1 > affy_1.4.23 > Biobase_1.4.10 > DynDoc_1.3.14 > gcrma_1.0.6 > hgu133acdf_1.4.3 > hgu95av2cdf_1.4.3 > hgu95av2probe_1.0 > matchprobes_1.0.7 > moe430acdf_1.4.3 > multcomp_0.4-6 > mvtnorm_0.6-6 > rae230acdf_1.4.3 > reposTools_1.3.29 > rgu34acdf_1.4.3 > tkWidgets_1.5.1 > widgetTools_1.2.7 > > 1. The rma function (in affy library) always crashes. > 2. When executing the sample code in gcrma function's document, the > following error occures: > Loading required package: matchprobes > Error in f(libname, pkgname) : couldn't find function > "addVigs2WinMenu" > > Does any one known any quick fix or workaround? > > James > > > [[alternative HTML version deleted]] > > ______________________________________________ > R-help at stat.math.ethz.ch mailing list > https://www.stat.math.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html >-- rossini at u.washington.edu http://www.analytics.washington.edu/ Biomedical and Health Informatics University of Washington Biostatistics, SCHARP/HVTN Fred Hutchinson Cancer Research Center UW (Tu/Th/F): 206-616-7630 FAX=206-543-3461 | Voicemail is unreliable FHCRC (M/W): 206-667-7025 FAX=206-667-4812 | use Email CONFIDENTIALITY NOTICE: This e-mail message and any attachme...{{dropped}}
Isn't this a report on problems with Bioconductor packages? If so, please ask the Bioconductor list as people there will have a much better idea of what you are trying to do. On Fri, 14 May 2004, Li, James [PRDUS Non-J&J] wrote:> I run R 1.9.0 on windows 2000, and have the following libraries installed:...> 1. The rma function (in affy library) always crashes. > 2. When executing the sample code in gcrma function's document, the > following error occures: > Loading required package: matchprobes > Error in f(libname, pkgname) : couldn't find function > "addVigs2WinMenu"Do take a look at what the R posting guide says about `crashes', though. -- Brian D. Ripley, ripley at stats.ox.ac.uk Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/ University of Oxford, Tel: +44 1865 272861 (self) 1 South Parks Road, +44 1865 272866 (PA) Oxford OX1 3TG, UK Fax: +44 1865 272595