Peter Ho
2002-Aug-14 15:15 UTC
[R]: use of Error() for repeated measures with more than 2 factors
I have been trying to analyse an unreplicated repeated measures 2-level factorial design with 11 factors using aov() with Error(), similar to that described in "Notes on the use of R for psychology experiments and questionnaires" by Jonathan Baron and Yuelin Li (see the example of Hay's) I have found that there seems to be a limit, in the number of factors in Error() . For example, the following worked : aov(CV ~(Twb+Plb+Psb+tinsb+tseedb+Tmb+Mcb+Mom0b+Mom1b+Mom2b+Mom3b)^3 + Error(Batch / (Twb+Plb+Psb+tinsb+tseedb+Tmb+Mcb)),simulation.6batches.aovdata) but not: aov(CV ~(Twb+Plb+Psb+tinsb+tseedb+Tmb+Mcb+Mom0b+Mom1b+Mom2b+Mom3b)^3 + Error(Batch / (Twb+Plb+Psb+tinsb+tseedb+Tmb+Mcb+Mom0b+Mom1b)),simulation.6batches.aovdata) which I suppose should be the right way to code the strata.formula for 11 fixed factors. Returned the following reply after running this script: >Error in eval(expr, envir, enclos) : couldn't find function "Error" The only difference between the two scripts is the second one contains all 11 factors. Is this a bug? Or should I be using lme() or some other function when the number of factors is greater than the "limit"? I would also like to hear some views as to whether Error() should be used for repeated measures, pro & cons,etc? I have found differing views in books. For example, Neter et al "applied linear statistical models " uses simply the combined treatment by subject interaction mean square when testing main effects and their interactions. They do state that the relaxation of the assumptions of a repeated measures model can be made by the inclusion of first-order interaction between each factor and subjects in the model. However, this still falls short of the ideas suggested with using Error() for testing.On the other hand, Mead's "the design of experiments puts repeated measures in the same chapter with split unit design, which are multistratum design. Jonathan Baron's and Yuelin Li's document also references a number of books on this matter. I know that this point is not really suitable for r-help, but it is related indirectly with regard to the use of strata.formula in Error(). Any comments would be grateful Peter Ho ISR-Porto -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html Send "info", "help", or "[un]subscribe" (in the "body", not the subject !) To: r-help-request at stat.math.ethz.ch _._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._