Michael Manning
2008-Mar-03 05:05 UTC
[R] Attempting to connect to an Empress RDBMS via RODBC 1.2-3 causes R 2.6.2.pat to segfault
Hi
I've experienced some unpleasant behaviour while attempting to connect to an
Empress 8.6.2 RDBMS via RODBC 1.2-3 and a freshly minted R 2.6.2.pat on a SLED
linux system where a call to odbcConnect() to initiate the odbc connection
causes R 2.6.2.pat to segfault.
The odbcConnect call is
CHANNEL <- odbcConnect("myEmpressDB", uid="myusername",
pwd="mysecurepassword", believeNRows=FALSE)
where "myEmpressDB" is an apparently correctly configured ODBC
datasource pointing at the Empress RDBMS I wish to access on my system. The R
version data for my system are
platform i686-pc-linux-gnu
arch i686
os linux-gnu
system i686, linux-gnu
status Patched
major 2
minor 6.2
year 2008
month 03
day 02
svn rev 44661
language R
version.string R version 2.6.2 Patched (2008-03-02 r44661)
All a bit surprising (to me, at least) as: (i) testing connections to the
Empress datasource with isql on my SLED linux system is successful, suggesting
to me that the Empress driver and the datasource are correctly configured; (ii)
I am able to successfully initiate a connection to a non-Empress odbc datasource
(postgres and mysql databases) on my SLED linux system within R and to send and
retrieve data from these; and (iii) an analogous setup (R, Empress odbc driver,
datasource,...) on a windows XP system that I have access to works flawlessly.
Any suggestions about how to proceed?
Thanks muchly,
Michael
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