Michael Gormley wrote:
> I am trying to preprocess a large dataset of affymetrix data. Creating an
affybatch is not possible with the computer I am running it on, so I have used
the justRMA command to run RMA. I have read the affy document describing the
justRMA command and the help documentation but I am unclear as to whether this
command uses median polish after normalization. I assume this is the case but
would like to be sure before proceeding. Could someone clear up this confusion?
Maybe you want to ask on the Bioconductor mailing list, in fact?
Uwe Ligges
> Thanks,
> Mike
> [[alternative HTML version deleted]]
>
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