Emmanuel Tillard
2006-Aug-02 15:13 UTC
[R] expected survival from a frailty cox model using survfit
Hello R users Would somebody know how to estimate survival from a frailty cox model, using the function survfit and the argument newdata ? (or from any other way that could provide individual expected survival with standard error); Is the problem related to how the random term is included in newdata ? kfitm1 <- coxph(Surv(time,status) ~ age + sex + disease + frailty(id, dist='gauss'), kidney) survfit(kfitm1) #ok for mean expected survival Call: survfit.coxph(object = kfitm1) n events median 0.95LCL 0.95UCL 76 58 63 39 132 survfit(kfitm1, newdata=kidney[1,]) #return an error message Erreur dans x2 %*% coef : arguments inad?quats Thanks in Advance -- Emmanuel Tillard Veterinaire CIRAD-EMVT Unite de recherche 18 UMR868 Elevage des Ruminants en Regions Chaudes (ERRC) Campus ENSA-INRA 2 place Viala 34060 Montpellier cedex 1 tel: 0499612265 (fixe) 0633850598 (gsm) fax: 0467545694 e-mail: tillard at cirad.fr