lescroel_cebc@no-log.org
2006-Feb-23 10:36 UTC
[R] Need confirmation of my lme() structure
Hello, I'm a new user of R and I would need somebody to confirm (or not!) that I'm doing right. I'm analyzing diving characteristics (maximal depth, etc...) of birds breeding in 2 sites, during 2 stages (see data structiring below). FILE SITE STAGE M04 :402 C: 471 Guard:1557 M13 :344 M:2143 Incub:1057 M10 :252 M14 :209 M15 :190 (Other):955 I want to analyse the effects of site and stage using REML analyses with site and stage as fixed factors and file (i.e. individual bird) as a random factor. In R, I would write the following command:> reml_depthmax <- lme(DEPTHMAX~SITE*STAGE, random=~1|FILE,na.action=na.omit) Am I right??? Many thanks for your help, Am??lie -- Am??lie Lescro??l, Ph.D. Centre d'Etudes Biologiques de Chiz?? - CNRS, UPR 1934 79360 Villiers en Bois France http://www.cebc.cnrs.fr/Uk_taaf/equip_AL.html