Hello, Everyone,
I am sorry that my message got truncated.
I resend it again as below:
Hello, R Users,
I have a list (say listexp) of 10,000 elements, each of which consists of a
matrix (5X6). It likes:
$"a"
trt1rep1 trt1rep2 trt2rep1 trt2rep2 ctlrep1 ctlrep2
[1,] 50 54 98 89 40 45
[2,] 60 65 76 79 34 43
[3,] 86 83 34 45 38 34
[4,] 67 78 88 98 45 41
[5,] 55 59 77 88 56 66
$"b"
trt1rep1 trt1rep2 trt2rep1 trt2rep2 ctlrep1 ctlrep2
[1,] 55 54 88 86 42 40
[2,] 66 65 86 99 44 48
[3,] 80 86 44 55 38 44
[4,] 77 78 98 92 35 41
[5,] 50 53 87 88 46 56
Hello, Everyone,
I am sorry that my message got truncated due to wrong format.
I hope it works now:
Hello, R Users,
I have a list (say listexp) of 10,000 elements, each of which consists of a
matrix (5X6). It likes:
$"a"
trt1rep1 trt1rep2 trt2rep1 trt2rep2 ctlrep1 ctlrep2
[1,] 50 54 98 89 40 45
[2,] 60 65 76 79 34 43
[3,] 86 83 34 45 38 34
[4,] 67 78 88 98 45 41
[5,] 55 59 77 88 56 66
$"b"
trt1rep1 trt1rep2 trt2rep1 trt2rep2 ctlrep1 ctlrep2
[1,] 55 54 88 86 42 40
[2,] 66 65 86 99 44 48
[3,] 80 86 44 55 38 44
[4,] 77 78 98 92 35 41
[5,] 50 53 87 88 46 56
.
I want to perform some operations on the list and then got a new list(say
expeffect) like this:
1. first average two replicates for each row in the matrix shown above (like for
treatment 1 using (trt1rep1+trt1rep2)/2) and get one value for each
treatment/control
2. then subtract average value of the control from the each treatment and get
one value for the treatment effect for each row in the matrix shown above
3. make a new list (say trteffect) with 2 elements (trt1 and trt2), each of
which consists of a matrix (10,000X5)with a row name same with old list's
element name, a column name corresponding to the row name of old list's
matrix
like:
$"trt1"
[,1] [,2] [,3] [,4] [,5]
a 9.5 24 48.5 29.5 -4
b 13.5 19.5 42 39.5 0.5
.
$"trt2"
[,1] [,2] [,3] [,4] [,5]
a 51 39 3.5 50 21.5
b 46 46.5 8.5 57 30.5
.
Could you please help me to make this new list (expeffect)?
Thank you in advance!
Joshua