O'Brien, Laura
2005-Jul-27 16:32 UTC
[R] core dump when call t.test via the "RJava --example --gui-none" interface
using ./RJava --example --gui-none to invoke t.test core dumps. The line of R works if I go directly thru R and not RJava. Version info and code are below. Any help would be appreciated. --Laura O'Brien Applications Architect Version info ------------ Java: jdk1.5.0_03 R: 2.1.1 SJava: 0.68 OS: SunOs 5.8 example code that works ----------------------- [omegahat->R] mean (c (1,2,3)) 2.0 example code that core dumps ----------------------------- [omegahat->R] t.test (c (1,2,3), c(4,5,6)) Unexpected Signal : 11 occurred at PC=0xFE0C2B44 Function=[Unknown. Nearest: JVM_Close+0x6BFC4] Library=/imports/filer04/tools/app/j2sdk1.4.1_02-20030305/j2sdk1.4.1_02/jre/lib/sparc/client/libjvm.so Current Java thread: at org.omegahat.R.Java.REvaluator.eval(Native Method) at org.omegahat.R.Java.REvaluator.eval(REvaluator.java:90) at org.omegahat.R.Java.REvaluator.eval(REvaluator.java:40) at org.omegahat.R.Java.Examples.JavaRPrompt.main(JavaRPrompt.java:26) Dynamic libraries: 0x10000 /tools/app/j2sdk1.4.1_02-20030305/j2sdk1.4.1_02/bin/java 0xff360000 /usr/lib/libthread.so.1 0xff3a0000 /usr/lib/libdl.so.1 0xff200000 /usr/lib/libc.so.1 0xff330000 /usr/platform/SUNW,Ultra-60/lib/libc_psr.so.1 0xfe000000 /imports/filer04/tools/app/j2sdk1.4.1_02-20030305/j2sdk1.4.1_02/jre/lib/sparc/client/libjvm.so 0xff2d0000 /usr/lib/libCrun.so.1 0xff1e0000 /usr/lib/libsocket.so.1 0xff100000 /usr/lib/libnsl.so.1 0xff0d0000 /usr/lib/libm.so.1 0xff300000 /usr/lib/libw.so.1 0xff0b0000 /usr/lib/libmp.so.2 0xff080000 /imports/filer04/tools/app/j2sdk1.4.1_02-20030305/j2sdk1.4.1_02/jre/lib/sparc/native_threads/libhpi.so 0xff050000 /imports/filer04/tools/app/j2sdk1.4.1_02-20030305/j2sdk1.4.1_02/jre/lib/sparc/libverify.so 0xfe7c0000 /imports/filer04/tools/app/j2sdk1.4.1_02-20030305/j2sdk1.4.1_02/jre/lib/sparc/libjava.so 0xff020000 /imports/filer04/tools/app/j2sdk1.4.1_02-20030305/j2sdk1.4.1_02/jre/lib/sparc/libzip.so 0xfdfc0000 /imports/filer04/tools/app/R-2.1.1/lib/R/library/SJava/libs/SJava.so 0xfdf90000 /imports/filer04/tools/app/R-2.1.1/lib/R/library/SJava/libs/libRSNativeJava.so 0xf1780000 /imports/filer04/tools/app/R-2.1.1/lib/R/lib/libR.so 0xfc7c0000 /tools/app/gcc-3.4.3/lib/libg2c.so.0 0xfc4e0000 /tools/app/gcc-3.4.3/lib/libgcc_s.so.1 0xfc4b0000 /tools/app/R-2.1.1/lib/R/library/grDevices/libs/grDevices.so 0xfc450000 /tools/app/R-2.1.1/lib/R/library/stats/libs/stats.so 0xfc430000 /tools/app/R-2.1.1/lib/R/library/methods/libs/methods.so Local Time = Wed Jul 27 12:28:07 2005 Elapsed Time = 28 # # HotSpot Virtual Machine Error : 11 # Error ID : 4F530E43505002E6 01 # Please report this error at # http://java.sun.com/cgi-bin/bugreport.cgi # # Java VM: Java HotSpot(TM) Client VM (1.4.1_02-b06 mixed mode) # # An error report file has been saved as /tmp/hs_err_pid22520.log. # Please refer to the file for further information. # Abort