R help - Nov 2012 - Proc Nnpar1way with D option - equivalent in R

I am trying to match SAS output with R. 

I am using Proc Npar1way with D option to get KS test statistic. 
?
Here X is a binary dependent variable and Y is the predicted probabilities;
proc npar1way data = mydata D; class x; var y; run;

When i try this in R 


ks.test(x, fitted(y),alternative = c("two.sided"),exact = NULL) I get
very
different result compared to SAS. 

I am new to R. Any help is appreciated. I think i am missing a datastep
maybe ?

Thank you.




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> -----Original Message-----
> From: r-help-bounces at r-project.org [mailto:r-help-bounces at
r-project.org]
> On Behalf Of SASandRlearn
> Sent: Monday, November 12, 2012 5:55 PM
> To: r-help at r-project.org
> Subject: [R] Proc Nnpar1way with D option - equivalent in R
> 
> I am trying to match SAS output with R.
> 
> I am using Proc Npar1way with D option to get KS test statistic.
> ?
> Here X is a binary dependent variable and Y is the predicted
> probabilities;
> proc npar1way data = mydata D; class x; var y; run;
> 
> When i try this in R
> 
> 
> ks.test(x, fitted(y),alternative = c("two.sided"),exact = NULL) I
get very
> different result compared to SAS.
> 
> I am new to R. Any help is appreciated. I think i am missing a datastep
> maybe ?
> 
> Thank you.
> 
> 
> 
To reproduce the SAS results in R, you need to specify the ks.test something
like:

ks.test(y[x==1], y[x==0],alternative = c("two.sided"),exact = NULL)

I say something "like", because I don't know what the binary
values for x are, so I just used 1 and 0.  If this doesn't help, then you
need to provide some data and your actual results so that you have an actual
reproducible example (see the posting guide).


Hope this is helpful,

Dan

Daniel Nordlund
Bothell, WA USA