Ulrich Halekoh
2011-May-13 12:01 UTC
[R] problem with makeSOCKcluster depending on R patch version
Dear,
I encountered a problem using the makeSOCKcluster function depending the patched
version of
R-2.13.0 I used.
library(snow)
cl <- makeSOCKcluster(rep("localhost", 2))
this works fine for the R-13.0 patch (2011-04-28 r55678)
but not for the patch R-13.0 patch (2011-05-10 r55826)
In the latter case the command keeps running. Interrupting the command I get
the error message
Error in socketConnection(port = port, server = TRUE, blocking = TRUE, :
cannot open the connection
In addition: Warning message:
In socketConnection(port = port, server = TRUE, blocking = TRUE, :
problem in listening on this socket
Does work
R version 2.13.0 Patched (2011-04-28 r55678)
Platform: i386-pc-mingw32/i386 (32-bit)
locale:
[1] LC_COLLATE=Danish_Denmark.1252 LC_CTYPE=Danish_Denmark.1252
[3] LC_MONETARY=Danish_Denmark.1252 LC_NUMERIC=C
[5] LC_TIME=Danish_Denmark.1252
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] snow_0.3-3
Does not work
R version 2.13.0 Patched (2011-05-10 r55826)
Platform: i386-pc-mingw32/i386 (32-bit)
locale:
[1] LC_COLLATE=Danish_Denmark.1252 LC_CTYPE=Danish_Denmark.1252
[3] LC_MONETARY=Danish_Denmark.1252 LC_NUMERIC=C
[5] LC_TIME=Danish_Denmark.1252
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] snow_0.3-3
Kind regards
Ulrich?Halekoh
Associate Professor
Aarhus University
Email: Ulrich.Halekoh at agrsci.dk
Uwe Ligges
2011-May-14 16:23 UTC
[R] problem with makeSOCKcluster depending on R patch version
On 13.05.2011 14:01, Ulrich Halekoh wrote:> Dear, > > I encountered a problem using the makeSOCKcluster function depending the patched version of > R-2.13.0 I used. > > > library(snow) > cl<- makeSOCKcluster(rep("localhost", 2)) > > this works fine for the R-13.0 patch (2011-04-28 r55678) > but not for the patch R-13.0 patch (2011-05-10 r55826)If R-2.13.0 patched is meant: I do not see this with a recent snapshot (2011-05-13 r55886). Uwe Ligges> > In the latter case the command keeps running. Interrupting the command I get the error message > > Error in socketConnection(port = port, server = TRUE, blocking = TRUE, : > cannot open the connection > In addition: Warning message: > In socketConnection(port = port, server = TRUE, blocking = TRUE, : > problem in listening on this socket > > > Does work > > R version 2.13.0 Patched (2011-04-28 r55678) > Platform: i386-pc-mingw32/i386 (32-bit) > > locale: > [1] LC_COLLATE=Danish_Denmark.1252 LC_CTYPE=Danish_Denmark.1252 > [3] LC_MONETARY=Danish_Denmark.1252 LC_NUMERIC=C > [5] LC_TIME=Danish_Denmark.1252 > > attached base packages: > [1] stats graphics grDevices utils datasets methods base > > other attached packages: > [1] snow_0.3-3 > > > Does not work > > R version 2.13.0 Patched (2011-05-10 r55826) > Platform: i386-pc-mingw32/i386 (32-bit) > > locale: > [1] LC_COLLATE=Danish_Denmark.1252 LC_CTYPE=Danish_Denmark.1252 > [3] LC_MONETARY=Danish_Denmark.1252 LC_NUMERIC=C > [5] LC_TIME=Danish_Denmark.1252 > > attached base packages: > [1] stats graphics grDevices utils datasets methods base > > other attached packages: > [1] snow_0.3-3 > > > Kind regards > Ulrich Halekoh > > Associate Professor > Aarhus University > Email: Ulrich.Halekoh at agrsci.dk > > ______________________________________________ > R-help at r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code.
Søren Højsgaard
2011-May-15 10:27 UTC
[R] problem with makeSOCKcluster depending on R patch version
That raises another question: Will that patched version (2011-05-13 r55886) be made available as a windows binary - and if so: when? Regards S?ren ________________________________________ Fra: r-help-bounces at r-project.org [r-help-bounces at r-project.org] På vegne af Uwe Ligges [ligges at statistik.tu-dortmund.de] Sendt: 14. maj 2011 18:23 Til: Ulrich Halekoh Cc: r-help at r-project.org Emne: Re: [R] problem with makeSOCKcluster depending on R patch version On 13.05.2011 14:01, Ulrich Halekoh wrote:> Dear, > > I encountered a problem using the makeSOCKcluster function depending the patched version of > R-2.13.0 I used. > > > library(snow) > cl<- makeSOCKcluster(rep("localhost", 2)) > > this works fine for the R-13.0 patch (2011-04-28 r55678) > but not for the patch R-13.0 patch (2011-05-10 r55826)If R-2.13.0 patched is meant: I do not see this with a recent snapshot (2011-05-13 r55886). Uwe Ligges> > In the latter case the command keeps running. Interrupting the command I get the error message > > Error in socketConnection(port = port, server = TRUE, blocking = TRUE, : > cannot open the connection > In addition: Warning message: > In socketConnection(port = port, server = TRUE, blocking = TRUE, : > problem in listening on this socket > > > Does work > > R version 2.13.0 Patched (2011-04-28 r55678) > Platform: i386-pc-mingw32/i386 (32-bit) > > locale: > [1] LC_COLLATE=Danish_Denmark.1252 LC_CTYPE=Danish_Denmark.1252 > [3] LC_MONETARY=Danish_Denmark.1252 LC_NUMERIC=C > [5] LC_TIME=Danish_Denmark.1252 > > attached base packages: > [1] stats graphics grDevices utils datasets methods base > > other attached packages: > [1] snow_0.3-3 > > > Does not work > > R version 2.13.0 Patched (2011-05-10 r55826) > Platform: i386-pc-mingw32/i386 (32-bit) > > locale: > [1] LC_COLLATE=Danish_Denmark.1252 LC_CTYPE=Danish_Denmark.1252 > [3] LC_MONETARY=Danish_Denmark.1252 LC_NUMERIC=C > [5] LC_TIME=Danish_Denmark.1252 > > attached base packages: > [1] stats graphics grDevices utils datasets methods base > > other attached packages: > [1] snow_0.3-3 > > > Kind regards > Ulrich Halekoh > > Associate Professor > Aarhus University > Email: Ulrich.Halekoh at agrsci.dk > > ______________________________________________ > R-help at r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code.______________________________________________ R-help at r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Uwe Ligges
2011-May-15 13:25 UTC
[R] problem with makeSOCKcluster depending on R patch version
On 15.05.2011 12:27, S?ren H?jsgaard wrote:> That raises another question: Will that patched version (2011-05-13 r55886) be made available as a windows binary - and if so: when?Daily builds for WIndows of R-patched are available from CRAN. Best, uwe> Regards > S?ren > > > > ________________________________________ > Fra: r-help-bounces at r-project.org [r-help-bounces at r-project.org] På vegne af Uwe Ligges [ligges at statistik.tu-dortmund.de] > Sendt: 14. maj 2011 18:23 > Til: Ulrich Halekoh > Cc: r-help at r-project.org > Emne: Re: [R] problem with makeSOCKcluster depending on R patch version > > On 13.05.2011 14:01, Ulrich Halekoh wrote: >> Dear, >> >> I encountered a problem using the makeSOCKcluster function depending the patched version of >> R-2.13.0 I used. >> >> >> library(snow) >> cl<- makeSOCKcluster(rep("localhost", 2)) >> >> this works fine for the R-13.0 patch (2011-04-28 r55678) >> but not for the patch R-13.0 patch (2011-05-10 r55826) > > > If R-2.13.0 patched is meant: I do not see this with a recent snapshot > (2011-05-13 r55886). > > > Uwe Ligges > > > >> >> In the latter case the command keeps running. Interrupting the command I get the error message >> >> Error in socketConnection(port = port, server = TRUE, blocking = TRUE, : >> cannot open the connection >> In addition: Warning message: >> In socketConnection(port = port, server = TRUE, blocking = TRUE, : >> problem in listening on this socket >> >> >> Does work >> >> R version 2.13.0 Patched (2011-04-28 r55678) >> Platform: i386-pc-mingw32/i386 (32-bit) >> >> locale: >> [1] LC_COLLATE=Danish_Denmark.1252 LC_CTYPE=Danish_Denmark.1252 >> [3] LC_MONETARY=Danish_Denmark.1252 LC_NUMERIC=C >> [5] LC_TIME=Danish_Denmark.1252 >> >> attached base packages: >> [1] stats graphics grDevices utils datasets methods base >> >> other attached packages: >> [1] snow_0.3-3 >> >> >> Does not work >> >> R version 2.13.0 Patched (2011-05-10 r55826) >> Platform: i386-pc-mingw32/i386 (32-bit) >> >> locale: >> [1] LC_COLLATE=Danish_Denmark.1252 LC_CTYPE=Danish_Denmark.1252 >> [3] LC_MONETARY=Danish_Denmark.1252 LC_NUMERIC=C >> [5] LC_TIME=Danish_Denmark.1252 >> >> attached base packages: >> [1] stats graphics grDevices utils datasets methods base >> >> other attached packages: >> [1] snow_0.3-3 >> >> >> Kind regards >> Ulrich Halekoh >> >> Associate Professor >> Aarhus University >> Email: Ulrich.Halekoh at agrsci.dk >> >> ______________________________________________ >> R-help at r-project.org mailing list >> https://stat.ethz.ch/mailman/listinfo/r-help >> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html >> and provide commented, minimal, self-contained, reproducible code. > > ______________________________________________ > R-help at r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code.
Søren Højsgaard
2011-May-15 14:23 UTC
[R] problem with makeSOCKcluster depending on R patch version
I just downloaded the patched version from the Danish mirror; http://mirrors.dotsrc.org/cran/ That gave me: R version 2.13.0 Patched (2011-05-10 r55826) - which is *not* the version you refer to. Where may one get the latest patch then? Regards S?ren ________________________________________ Fra: Uwe Ligges [ligges at statistik.tu-dortmund.de] Sendt: 15. maj 2011 15:25 Til: S?ren H?jsgaard Cc: Ulrich Halekoh; r-help at r-project.org Emne: Re: SV: [R] problem with makeSOCKcluster depending on R patch version On 15.05.2011 12:27, S?ren H?jsgaard wrote:> That raises another question: Will that patched version (2011-05-13 r55886) be made available as a windows binary - and if so: when?Daily builds for WIndows of R-patched are available from CRAN. Best, uwe> Regards > S?ren > > > > ________________________________________ > Fra: r-help-bounces at r-project.org [r-help-bounces at r-project.org] På vegne af Uwe Ligges [ligges at statistik.tu-dortmund.de] > Sendt: 14. maj 2011 18:23 > Til: Ulrich Halekoh > Cc: r-help at r-project.org > Emne: Re: [R] problem with makeSOCKcluster depending on R patch version > > On 13.05.2011 14:01, Ulrich Halekoh wrote: >> Dear, >> >> I encountered a problem using the makeSOCKcluster function depending the patched version of >> R-2.13.0 I used. >> >> >> library(snow) >> cl<- makeSOCKcluster(rep("localhost", 2)) >> >> this works fine for the R-13.0 patch (2011-04-28 r55678) >> but not for the patch R-13.0 patch (2011-05-10 r55826) > > > If R-2.13.0 patched is meant: I do not see this with a recent snapshot > (2011-05-13 r55886). > > > Uwe Ligges > > > >> >> In the latter case the command keeps running. Interrupting the command I get the error message >> >> Error in socketConnection(port = port, server = TRUE, blocking = TRUE, : >> cannot open the connection >> In addition: Warning message: >> In socketConnection(port = port, server = TRUE, blocking = TRUE, : >> problem in listening on this socket >> >> >> Does work >> >> R version 2.13.0 Patched (2011-04-28 r55678) >> Platform: i386-pc-mingw32/i386 (32-bit) >> >> locale: >> [1] LC_COLLATE=Danish_Denmark.1252 LC_CTYPE=Danish_Denmark.1252 >> [3] LC_MONETARY=Danish_Denmark.1252 LC_NUMERIC=C >> [5] LC_TIME=Danish_Denmark.1252 >> >> attached base packages: >> [1] stats graphics grDevices utils datasets methods base >> >> other attached packages: >> [1] snow_0.3-3 >> >> >> Does not work >> >> R version 2.13.0 Patched (2011-05-10 r55826) >> Platform: i386-pc-mingw32/i386 (32-bit) >> >> locale: >> [1] LC_COLLATE=Danish_Denmark.1252 LC_CTYPE=Danish_Denmark.1252 >> [3] LC_MONETARY=Danish_Denmark.1252 LC_NUMERIC=C >> [5] LC_TIME=Danish_Denmark.1252 >> >> attached base packages: >> [1] stats graphics grDevices utils datasets methods base >> >> other attached packages: >> [1] snow_0.3-3 >> >> >> Kind regards >> Ulrich Halekoh >> >> Associate Professor >> Aarhus University >> Email: Ulrich.Halekoh at agrsci.dk >> >> ______________________________________________ >> R-help at r-project.org mailing list >> https://stat.ethz.ch/mailman/listinfo/r-help >> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html >> and provide commented, minimal, self-contained, reproducible code. > > ______________________________________________ > R-help at r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code.
Uwe Ligges
2011-May-16 07:37 UTC
[R] problem with makeSOCKcluster depending on R patch version
On 15.05.2011 16:23, S?ren H?jsgaard wrote:> I just downloaded the patched version from the Danish mirror; http://mirrors.dotsrc.org/cran/ > > That gave me: R version 2.13.0 Patched (2011-05-10 r55826) - which is *not* the version you refer to. > > Where may one get the latest patch then?Latest binaries are available from http://cran.r-project.org/bin/windows/base/rpatched.html which contains the build you said. I know Duncan tries to provide that regularly. If that fails for some reason (like it obviously did the last few days, obviously), you will have to build it yourself. Best, Uwe> Regards > S?ren > > > > > > ________________________________________ > Fra: Uwe Ligges [ligges at statistik.tu-dortmund.de] > Sendt: 15. maj 2011 15:25 > Til: S?ren H?jsgaard > Cc: Ulrich Halekoh; r-help at r-project.org > Emne: Re: SV: [R] problem with makeSOCKcluster depending on R patch version > > On 15.05.2011 12:27, S?ren H?jsgaard wrote: >> That raises another question: Will that patched version (2011-05-13 r55886) be made available as a windows binary - and if so: when? > > Daily builds for WIndows of R-patched are available from CRAN. > > Best, > uwe > >> Regards >> S?ren >> >> >> >> ________________________________________ >> Fra: r-help-bounces at r-project.org [r-help-bounces at r-project.org] På vegne af Uwe Ligges [ligges at statistik.tu-dortmund.de] >> Sendt: 14. maj 2011 18:23 >> Til: Ulrich Halekoh >> Cc: r-help at r-project.org >> Emne: Re: [R] problem with makeSOCKcluster depending on R patch version >> >> On 13.05.2011 14:01, Ulrich Halekoh wrote: >>> Dear, >>> >>> I encountered a problem using the makeSOCKcluster function depending the patched version of >>> R-2.13.0 I used. >>> >>> >>> library(snow) >>> cl<- makeSOCKcluster(rep("localhost", 2)) >>> >>> this works fine for the R-13.0 patch (2011-04-28 r55678) >>> but not for the patch R-13.0 patch (2011-05-10 r55826) >> >> >> If R-2.13.0 patched is meant: I do not see this with a recent snapshot >> (2011-05-13 r55886). >> >> >> Uwe Ligges >> >> >> >>> >>> In the latter case the command keeps running. Interrupting the command I get the error message >>> >>> Error in socketConnection(port = port, server = TRUE, blocking = TRUE, : >>> cannot open the connection >>> In addition: Warning message: >>> In socketConnection(port = port, server = TRUE, blocking = TRUE, : >>> problem in listening on this socket >>> >>> >>> Does work >>> >>> R version 2.13.0 Patched (2011-04-28 r55678) >>> Platform: i386-pc-mingw32/i386 (32-bit) >>> >>> locale: >>> [1] LC_COLLATE=Danish_Denmark.1252 LC_CTYPE=Danish_Denmark.1252 >>> [3] LC_MONETARY=Danish_Denmark.1252 LC_NUMERIC=C >>> [5] LC_TIME=Danish_Denmark.1252 >>> >>> attached base packages: >>> [1] stats graphics grDevices utils datasets methods base >>> >>> other attached packages: >>> [1] snow_0.3-3 >>> >>> >>> Does not work >>> >>> R version 2.13.0 Patched (2011-05-10 r55826) >>> Platform: i386-pc-mingw32/i386 (32-bit) >>> >>> locale: >>> [1] LC_COLLATE=Danish_Denmark.1252 LC_CTYPE=Danish_Denmark.1252 >>> [3] LC_MONETARY=Danish_Denmark.1252 LC_NUMERIC=C >>> [5] LC_TIME=Danish_Denmark.1252 >>> >>> attached base packages: >>> [1] stats graphics grDevices utils datasets methods base >>> >>> other attached packages: >>> [1] snow_0.3-3 >>> >>> >>> Kind regards >>> Ulrich Halekoh >>> >>> Associate Professor >>> Aarhus University >>> Email: Ulrich.Halekoh at agrsci.dk >>> >>> ______________________________________________ >>> R-help at r-project.org mailing list >>> https://stat.ethz.ch/mailman/listinfo/r-help >>> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html >>> and provide commented, minimal, self-contained, reproducible code. >> >> ______________________________________________ >> R-help at r-project.org mailing list >> https://stat.ethz.ch/mailman/listinfo/r-help >> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html >> and provide commented, minimal, self-contained, reproducible code.