Maria Dulce Subida
2011-Feb-16 10:04 UTC
[R] add regression equation to panel.lm - package psych
Dear all, I created a scatterplot matrix with the scatterplot and linear regression line in the upper panel, the density histogram in the diagonal panel and the values of the Pearson coefficient, probability and number of observations used, in the lower panel. Please see the script above. Now I would like to add the regression equation to the upper panel. I thought it would be something simple, but I was not able to figure it out. Any ideas, please? Thanks a lot! Dulce ________________ library(car) library(psych) panel.cor<- function(x, y, method="pearson", digits=2,...) { points(x,y,type="n"); usr<- par("usr"); on.exit(par(usr)) par(usr = c(0, 1, 0, 1)); correl<- cor.test(x,y, method=method, use="complete.obs"); sum.row<- rowSums(cbind(x,y)); conta.n<- length(sum.row[!is.na(sum.row)]); n=conta.n; r=correl$estimate; pval=correl$p.value; color="black"; fontface=1; if (pval<0.05) fontface=2; txt<- format(r,digits=2) pval<- format(pval,digits=2) txt<- paste("r= ", txt, "\np=",pval, "\nn=", n, sep="") text(0.5, 0.5, txt,col=color, font=fontface) } panel.diag<-function(x, ...) { usr<- par("usr"); on.exit(par(usr)) par(usr = c(usr[1:2], 0, 1.5) ) h<- hist(x, plot = FALSE) breaks<- h$breaks; nB<- length(breaks) y<- h$counts; y<- y/max(y) rect(breaks[-nB], 0, breaks[-1], y, col="grey", ...) d<- density(x,na.rm=TRUE,bw="nrd",adjust=1.2) d$y<- d$y/max(d$y) lines(d) } pairs (~ x + y + z + q, data=my_data, main = "my_data", na.action "na.pass", diag.panel=panel.diag, upper.panel=panel.lm, col.lm="grey", lower.panel=panel.cor, pch=20, cex=0.5, cex.labels=1, font.labels=2, lwd=0.5)