R help - Sep 2009 - questions on csv reading

Hi,

Is there any official way to determine the colClasses of a data.frame?
Why has POSIXct such a strange class structure?
Why is colClasses "ordered" not allowed (and doesn't work)?

Background
=========I am writing a chunked csv reader that provides the functionality of
read.table for large files (in the next version of package ff). In chunked
reading, one wants to learn the colClasses from the data.frame returned for the
first chunk and submit this as argument colClasses= to the following chunks
(following calls to read.table).

for most column types 
colClasses <- sapply(data.frame, class)
works fine. However, two column types have more than one class: 

"ordered" has c("ordered", "factor") - currently
we can't tell read.table that a column is an ordered factor

"POSIXct" has c("POSIXt","POSIXct") - here the
LESS specific class "POSIXt" is in the first position and would win in
class-dispatch over the MORE specific class "POSIXct". Why?


Jens Oehlschl?gel

-- 
GRATIS f?r alle GMX-Mitglieder: Die maxdome Movie-FLAT!

2009/9/26 "Jens Oehlschl?gel" <oehl_list at
gmx.de>:
> Hi,
>
> Is there any official way to determine the colClasses of a data.frame?
> Why has POSIXct such a strange class structure?
> Why is colClasses "ordered" not allowed (and doesn't work)?
>
> Background
> =========> I am writing a chunked csv reader that provides the
functionality of read.table for large files (in the next version of package ff).
In chunked reading, one wants to learn the colClasses from the data.frame
returned for the first chunk and submit this as argument colClasses= to the
following chunks (following calls to read.table).
>
> for most column types
> colClasses <- sapply(data.frame, class)
> works fine. However, two column types have more than one class:
>
> "ordered" has c("ordered", "factor") -
currently we can't tell read.table that a column is an ordered factor
Possibly more complex than one would wish but it is possible to do this:

Lines <- "A
B
D
C"

setOldClass("ordered")
setAs("character", "ordered", function(from) ordered(from))

DF <- read.table(textConnection(Lines), colClasses = "ordered")
str(DF)
> "POSIXct" has c("POSIXt","POSIXct") - here
the LESS specific class "POSIXt" is in the first position and would
win in class-dispatch over the MORE specific class "POSIXct". Why?
>
Its a historical error that is too late to correct now.  See
discussion in Chambers' recent book.