J S
2009-Mar-15 12:41 UTC
[R] Tukey, planned contrasts or t-test without ANOVA? What is correct?
Dear R community, I compare mean monthly body temperature between two age classes of turtles overwintering underground. lm(body_tem ~ Month*Year*Age_Class) TukeyHSD(aov(body_tem ~ Month*Year*Age_Class, a)) The Tukey HSD as well as the planned contrasts method showed significant differences between the two age classes, but insignificant differences between the two age classes at the same levels of months. In the opposite, using a t-test for comparison of independent means (i.e. without using the ANOVA) it demonstrated insignificant differences between the two age classes. What result is correct? Thanks, Julia _________________________________________________________________ cns!503D1D86EBB2B53C!2285.entry?ocid=TXT_TAGLM_WL_UGC_Contacts_032009 [[alternative HTML version deleted]]
Dieter Menne
2009-Mar-15 21:53 UTC
[R] Tukey, planned contrasts or t-test without ANOVA? What is correct?
J S <yulya258 <at> hotmail.com> writes:> I compare mean monthly body temperature between two age classes of turtlesoverwintering underground.> > lm(body_tem ~ Month*Year*Age_Class) > TukeyHSD(aov(body_tem ~ Month*Year*Age_Class, a)) > > The Tukey HSD as well as the planned contrasts method showed significantdifferences between the two age> classes, but insignificant differences between the two age classes at the samelevels of months.> > In the opposite, using a t-test for comparison of independent means (i.e.without using the ANOVA) it> demonstrated insignificant differences between the two age classes. Whatresult is correct? If the more detailed breakdown shows an effect, use it, because it tells you that grouping was over different classes. Dieter