Displaying 20 results from an estimated 10000 matches similar to: "R-installation"
2006 Jul 10
1
R newbie
Hello,
I am new to R and still feeling my way thru it.
I am trying to plot the values from this file below on the X-axis of a plot. I
have attached the graph to the email...the one i am trying to recreate.
Exon start end
5'UTR 22540060 22540121
1 22540122 22540140
2 22540303 22540493
3 22541552 22541565
4 22542373 22542519
5 22544265 22544432
3'UTR 22544433 22544856
I would like to
2006 May 19
2
my first R program
Hello,
This is my first attempt at using R. Still trying to figure out and understand
how to work with data frames.
I am trying to plot the following data(example). Some experimental data i am
trying to plot here.
1) i have 2 files
2) First File:
Number Position
1 120
2 134
3 156
4 169
5 203
3) Second File:
Col1 Col2 p-val
1 2 0.45
1 2 0.56
2 3 0.56
2 3 0.68
2 3
2006 Feb 20
2
Unable to configure R 2.2.1 on Solaris 5.10 x86_64
Hello,
Apologies for the post here. I have read the R-Admin (learned
a lot!) and searched the web for days, but still fail at compiling R on
my Ultra 20 running solaris 10 x86 1/06.
This is the tail of './configure' output:
.....
checking for dlopen in -ldl... yes
checking readline/history.h usability... no
checking readline/history.h presence... no
checking for readline/history.h... no
2008 Feb 25
1
r44608 fails make check-all in scatter.smooth example
Dear List,
Having had my appetite sufficiently whetted by Prof. Ripley's email
about the new graphics capabilities in Unixes, I wanted to try them out.
I updated to svn r44608, configured with the following options:
R is now configured for x86_64-unknown-linux-gnu
Source directory: ..
Installation directory: /usr/local
C compiler: gcc -O3 -g -std=gnu99
2005 Oct 11
1
Compile problem R 2.2.0 + Solaris 10 x86
Hi!
I'm trying to compile R (32-bit) on Solaris 10 x86
using Sun Studio 10 + Sun Perflib (for BLAS and
LAPACK) but encountered issues with undefined symbol
"bratio". Appreciate any help.
Compiler options (from configure output):
==============================================
R is now configured for i386-pc-solaris2.10
Source directory: .
Installation directory:
2006 Jul 22
1
compile R with ACML support | RHEL 4
Greetings -
I'm trying to compile R under GNU/Linux (RHEL 4) on a multi-Opteron box,
with ACML support.
First, I downloaded and installed ACML 3.5 - GNU version, although I'm
not entirely sure what the differences are - from the AMD website. The
ACML libraries were installed to /opt/acml3.5.0/
Second, I ran ./configure --with-blas='-lacml'
The configure went fine,
2013 May 17
1
Windows Pathnames with spaces in Puppet file directive
I have to change a file in c:\Program Files
<x86>\MSBuild\Microsoft.Cpp\v4.0. I have tried various ways to encapsule
the Windows path with spaces but to no avail.
The following
file { "\"c:\\program files
<x86>\\MSBuild\\Microsoft.Cpp\\v4.0\\Microsoft.CppCommon.targets\"":
ensure => present,
source =>
2009 Mar 10
2
problem with concatinating string while taking as a path of a file
Hi all,
I have a problem with concatinating strings while taking as a path here the
problem is
i have to take path as
FPATH<-"D:\\Kiran"
and file name as
Fname<-"FINDINGS.CSV"
and while I am reading this table I have to take path with using these two
strings because in "FPATH" there is many files like findings.csv,
and path will be
2008 Jun 13
2
compiling 2.7.0 GNU/Linux | BLAS & Lapack query
Greetings -
For a host of reasons I chose (was forced) to upgrade my multi-Opteron box
from Fedora 7 -> Fedora 8. In the process, I also updated the ACML I had
installed from 4.0.0 to 4.1.0.
While I get no errors (that I can find) in the config -> make -> make
install sequence, I'm pretty sure (based on some benchmarks) that I'm not
getting BLAS and/or Lapack to compile in. So,
2004 Mar 16
2
make check failed for R-1.9.0alpha (2004-03-16) when link against Goto's BLAS
Dear all,
Has anyone seen the same problem? I tried compiling R-1.9.0 alpha
(2004-03-16) on our Opteron box running SUSE Linux ES8. I ran:
./configure --enable-R-shlib --with-blas=goto
and got:
Source directory: .
Installation directory: /usr/local
C compiler: gcc -m64 -O2 -g -msse2 -march=k8 -Wall
--pedantic
C++ compiler: g++ -m64 -O2 -g
2004 Jun 07
2
(low level) profiling of code
Dear R-help,
Can some one tell me how to profile compiled code dynamically loaded into R?
Here's what I tried on our dual Opteron running SUSE Linux Enterprise Server
8 (GCC 3.3):
Start with R-patched dated 2004-06-07:
(I also had MAIN_CFLAGS="-pg" in config.site.)
R is now configured for x86_64-unknown-linux-gnu
Source directory: .
Installation directory:
2007 Dec 10
1
[Problem] [Centos 5] Samba-3.0.23c-2 login authentication problem
Hello,
I have comfigured samba-3.0.23c-2 server on CentOS-5, but when i was logging in from the client system, even if I donot provide password and hit enter key, the client is logging in as Anonymous user. Samba server should not allow for Anonymous login. (I am configuring linux (Server) to linux (Client) i am not using windows)
1) The contents of /etc/samba/smb.conf file as follows,
2009 Jan 20
1
problem with applying where condition
Hi all,
I am a biggener in R-Project
I got one problem with applying *where condition*
like
if 2 tables like
table1:
empid name dep
101 kiran solutions
102 ram testing
103 pavan database
table2:
empid month sal
101 Dec 9500
102 Dec 9800
103 Dec 8500
in first table i have to take *empid* with
2007 Nov 05
1
i need a help in getting some files which are missing in speex-1.2 beta 2
Sir,
iam a PG student doing thesis work in CELP based speech coding
i need to implement the same in ti-6416 kit and i have seen the open
source "speex.org"
but i found 3 files missing in the source files package
the files are the following :
1. types.h
2. alloca.h
3. _G_config.h
also i haven't got the source files ( *.snd files and *.dat files) to
be encoded
that is
2008 Jul 30
1
Hello,
Hello,
A newbie to R. I am trying to use the exonmap package in R.
According to the docs, the xmapDatabase() command should read the
config file with all the connection parameters and connect to the DB.
But i get the error shown below....
> xmapDatabase("Human")
Error in mysqlNewConnection(dbDriver(drv), ...) :
RS-DBI driver: (could not connect cagadmin at mysql2.cag.chop.edu on
2004 Oct 11
2
64-bit R on Intel Xeon EM64T running fine
Dear mailing-list members,
In the days of cheap RAM and microarray applications feasting on memory,
64-bit computers become more and more useful - to actually make use of memory
beyond the magic 4GB border. I would like to report the success of running
64-bit R on an Intel Xeon EM64T machine under Linux. Just like on an AMD
Opteron, R v2.0.0 compiles fine (and out of the box) and is happily
2009 Dec 17
2
Problem with spliting a dataframe values
Hi all,
Hi this is kiran
I am facing a problem to split a dataframe
that is..
i have a string like: "a,b,c|1,2,3|4,5,6|7,8,8"
first I have to split with respect to "|"
I did it with command
unlist(strsplit("a,b,c|1,2,3|4,5,6|7,8,8", "\\,"))
after getting that set i made it as a dataframe and it comes like
a,b,c
1,2,3
4,5,6
7,8,8
now i have to
2003 Aug 19
1
seed_rng
Hello,
I am trying to port Openssh to MIPS platform. I am facing some problems
with the function seed_rng(). I get a segmentation fault when this function
is executed.
Any suggestion will be appreciated.
Kiran.
*******************************************************
Kiran R Rao
Software Engineer
Integrated Device Technology,Inc.
(408)-330-1835
2004 Dec 14
3
make check-all failed on SLES8 for x86_64
Hi all,
I've only now noticed that on our Opteron boxes running Suse Enterprise
Server 8 that R-2.0.1 did not pass make chek-all. It bombed in
tests/lapack.R at:
> eigenok <- function(A, E, Eps = 1000 * .Machine$double.eps) {
V <- E$vect
lam <- E$values
stopifnot(abs(A %*% V - V %*% diag(lam)) < Eps, .... [TRUNCATED]
> Ceigenok <- function(A, E, Eps =
2014 Jun 04
2
opus_multistream_encode_float not working in libopus 1.1
> Have you tried compiling it yourself?
I just installed git for the first time and downloaded all of the
latest source code packages directly from the site. I'm getting the
following every time I try to (re)build any of the projects:
1>------ Build started: Project: opus, Configuration: Release Win32 ------
1> fatal: Not a git repository: 'C:\My