similar to: Rcommander installation fails on Fedora 9

Hi, I have been trying to install the Matrix package on R running in Linux (Fedora). But, I get the following error message (at the bottom). I am logged in as the root user. Any help would be appreciated! Thanks! -Hyunseung Kang * Installing *source* package 'Matrix' ... Using GNU make for building the package ** libs ** arch - gcc -m32 -std=gnu99 -I/usr/include/R

Hello, Apologies in advance if this is not the appropriate forum for this post. My problem is I'm not able to install the package "GPLOTS". Below are the outputs for the commands: sessionInfo() and install.packages("gplots",dependencies=TRUE). It seems the package "GDATA" is part of the problem but I'm not an expert in this. The "GDATA" package

I upgraded my system to Fedora Core 7 and got a compilation problem when installing Hmisc package. According to the error messages (shown below), I have tried to updated all of my glibc, gcc, automake rpm packages, but that did not help. Could you help me pointed out what package I have missed? Thank you. > version _ platform i386-redhat-linux-gnu arch i386 os linux-gnu system i386, linux-gnu

Dear R users. Recently I wanted to update my R distribution to the current one (R-2.7.1). I am running a Fedora core 8 distirbution. The installation went fine, but when I tried to add some additional packages the majority made an exit with an error. Only a few least demanding (e.g. RColorBrewer) managed to get through the installation process. What happened between the versions 2.6.x and 2.7.x

Dear all, I was wandering what could be wrong with my system (regularly updated Fedora core 8) so that installing packages does not succeed with almost every package. I follow the procedure specified in the help file R-admin section 6.3. This is not a feature new to the current version but happened (to me) in the previous version as well. Additionally R-help html pages try to follow wrong links

Hi, hpa wrote: > On PowerPC (I think) "unsigned char" is the default. In any case it seems a good idea to interpret the character more explicitely. To my experience, one signdness change causes a little tree of consequential signedness changes or questionable cast operations. How about the following instead ? if ((c >= 0 && c <= ' ') || c == '\x7f')

Hello, I just updated from R 2.1.1 to R 2.3.1 (I also updated from Fedora 3 to Fedora 4 if that is of any importance). However, several packages (e.g. fields etc.) refuse to be installed. I get the following error message: [root at localhost R-files]# R CMD INSTALL fields_2.3.tar.gz * Installing *source* package 'fields' ... ** libs g77 -fpic -O2 -g -pipe -m32 -march=i386

I'm trying to install the ordinal package (http://popgen.unimaas.nl/~plindsey/rlibs.html). I downloaded ordinal03.tgz and untarred it. rmutil was previously installed (and appears to work ok.) Then I installed ordinal: [root at localhost ~]# R CMD INSTALL /home/chippy/Download/ordinal * Installing to library '/usr/lib/R/library' * Installing *source* package 'ordinal' ... **

Trying to install rails/fcgi/apache2. Following these instructions: http://xmlareas.com/ruby-rails-howto.html Using Fedora Core 4. I installed ruby and ruby-devel using apt-get. Everything under Adding FastCGI (optional) works fine up to the gem install fcgi part. Here is what happens: [root@paulbarry fcgi-2.4.0]# gem install fcgi -r -- -with-fcgi-lib=/usr/local/fcgi/lib

I tested also with a clean git source. Something wrong with ole32. Code: -fPIC -Wall -pipe -fno-strict-aliasing -Wdeclaration-after-statement -Wempty-body -Wstrict-prototypes -Wtype-limits -Wwrite-strings -fno-omit-frame-pointer -Wpointer-arith -Wlogical-op -I/usr/include/freetype2 -g -O2 -U_FORTIFY_SOURCE -D_FORTIFY_SOURCE=0 -o tmarshal_i.o tmarshal_i.c

Hello, The package builds successfully on RHEL5 and OS X( 64 bit,32/64 respectively) but on FC4(32 bit) it fails with this error g++ -m32 -I/usr/include/R -I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i386 -mtune=generic -fasynchronous-unwind-tables -I. -g `pkg-config --cflags protobuf` -Wall -c

any ideas why it won't compile? running /root/samba-3.0.28a/packaging/RHEL/makerpms.sh eventually it gets to: ./autogen.sh: running script/mkversion.sh ./script/mkversion.sh: 'include/version.h' created for Samba("3.0.28a") ./autogen.sh: running autoheader -I. -Ilib/replace ./autogen.sh: running autoconf -I. -Ilib/replace Now run ./configure and then make. +

Hi All: I get the following error when trying to install the rjags package. I've installed the jags software and I'm using Fedora 10.0 and my sessionInfo is at the bottom of this email. I'm also sorry if this email ends up having control A's all over it. I still haven't figured how to fix that. Thanks. [1] "LOADING MASS LIBRARY" checking for

Dear all, I met a problem when installing new packages on R, my system is linux fedora 6.0, the following is output. please help me. Thanks. > install.packages('lars') --- Please select a CRAN mirror for use in this session --- Loading Tcl/Tk interface ... done trying URL 'http://www.stathy.com/cran/src/contrib/lars_0.9-5.tar.gz' Content type 'application/x-tar' length

Hi, I'm trying to install RMySQL and I keep hitting errors. My computer is: uname -a Linux cricket 2.6.18-92.1.22.el5PAE #1 SMP Tue Dec 16 12:36:25 EST 2008 i686 i686 i386 GNU/Linux I have set the following environment settings: export PKG_LIBS="-L/usr/lib/mysql -lmysqlclient" export PKG_CPPFLAGS="-I/usr/include/mysql" I run the following command: R CMD INSTALL

I'm running samba-3.2.6/packaging/RHEL/makerpms.sh and get the following error. any ideas? make: Nothing to be done for `modules'. make: Nothing to be done for `pam_smbpass'. + cd client + gcc -o mount.cifs -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i386 -mtune=generic -fasynchronous-unwind-tables -D_GNU_SOURCE

Dear all, I'm having problems installing the colorspace package on Red Hat Enterprise Linux 5: * Installing *source* package 'colorspace' ... ** libs gcc -std=gnu99 -I/usr/lib/R/include -I/usr/lib/R/include -I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i386 -mtune=generic

Dear, I've installed the following R version on HP compaq 6710 b under Fedora 8: > version _ platform i386-redhat-linux-gnu arch i386 os linux-gnu system i386, linux-gnu status major 2 minor 6.2 year 2008 month 02 day 08 svn rev 44383 language R version.string R version 2.6.2 (2008-02-08) When I try to install some R packages I receive the following message: [root at localhost

I am trying to debug the Xen hypervisor from a second computer over the serial port, but nothing seems to work. Using mercurial, I got xen-3.2-testing.hg. I followed the steps in crashdb.txt in the docs/misc/ folder: set debug=y in Config.mk, crash_debug=y in xen/Rules.mk I also added -fno-omit-frame-pointer to these file as well. I compiled with no errors and booted with minicom connected to

Dear list members, I encountered this problem and the solution pointed out in a previous thread did not work for me. (e.g. install.packages("RCurl", repos = "http://www.omegahat.org/R") I work with Ubuntu Hardy, and installed R 2.6.2 via apt-get. I really need RCurl in order to use biomaRt ... any help would be greatly appreciated. Best wishes, Emmanuel