similar to: R CMD SHLIB problem with -lg2c and make:

Dear developeRs, I'm trying to build R (2.7.1, on an x86_64 running Linux, but I believe I have observed this on x86 and with earlier versions of R as well) using external BLAS and LAPACK libraries _and_ generating libR.so, libRblas.so and libRlapack.so. Without --enable-BLAS-shlib, configure is able to find and use the external LAPACK library: ./configure \

After upgrading from mandrake 10.1 to mandriva 10.2 I can't build shared archive with R 2.2.0 [guillot at laplace src]$ R CMD SHLIB main.f sub.f wrapper.c gcc -shared -L/usr/local/lib -o main.so main.o sub.o wrapper.o -lg2c -lm -lgcc_s /usr//bin/ld: cannot find -lg2c collect2: ld returned 1 exit status make: *** [main.so] Erreur 1 I guess the information in

Yes, changing line 67 of SHLIB as Uwe suggested worked: C:\TEMP>Rcmd SHLIB tryf.f make[1]: `libR.a' is up to date. rm -f -f tryf.a ar cr tryf.a *.o ranlib tryf.a ------- Building tryf.dll from tryf.a -------- echo LIBRARY tryf > tryf.def echo EXPORTS >> tryf.def nm tryf.a > Defs sed -n '/^........ [BCDRT] _/s/^........ [BCDRT] _/ /p' Defs >> tryf.def rm -f Defs

Hi all, I would like to preform an autologistic regression analysis on my thesis data. This is a form of logistic regression that accounts for spatial autocorrelation within and between predictor variables. To this end I have received some script from Dr. Fred Huffer which will allow for the analysis in R. It consists of an R script (autolog.R) that calls a compiled Fortran script (combo.o).

Prof. Ripley, Seems like mine is 629: c:\home>perl -v This is perl, v5.6.1 built for MSWin32-x86-multi-thread (with 1 registered patch, see perl -V for more detail) Copyright 1987-2001, Larry Wall Binary build 629 provided by ActiveState Tool Corp. http://www.ActiveState.com Built 12:27:04 Aug 20 2001 Will try a newer build and see. Regards, Andy > -----Original Message----- >

Hello, I'm using R 2.5.0 with OS X 10.4.9 and Xcode 2.4.1 on a PowerPC. My code used to compile fine with R 2.4.* and Xcode 2.2 (I think). I'm compiling some C code (named mhroc_prop.c) that calls a fortran routine from mvndstpack.f I get the error /usr/bin/libtool: file: mvndstpack.o is not an object file (not allowed in a library) after R outputs (sorry... not sure if this is

Thanks for the answers on readme.packages. I have installed Rw1031 from SetupR.exe including the option for compiling source files and, following directions in www.stats.ox.ac.ul/pub/Rtools, have installed: -tools.zip -Perl (Active Perl) -mingw-1.1.tar.gz -copied sh.exe to c:\bin\sh.exe After Perl installation, its directory is added to my path. I have also added the directory where the R

This is prompted by trying to run the 'inline' package on Mac OS X Leopard = with R 2.10.1. Mac uses completely crazy temp paths and R uses those as wel= l. The inline package creates source files in the temp directory which it t= hen compiles with R CMD SHLIB and attaches. The compilation fails with the = error message below which seems to be caused by the complexity of the path =

Hi I've built a dll using Fortran code and can call it by either R or Fortran. Calling by the former gives me the wrong answer and the later gives the correct answer. >From what I've read, it looks like I should use the subroutines DBLEPR, INTPR and REALPR to print to the R console rather than using Fortran standard I/O and that if I use the command R CMD SHLIB source.f that these

Dear, When trying to use directive OpenMP in my code, I observed that the directive ones were being considered as commentaries. Compiling with command R CMD SHLIB xxx.f95 - fopenmp and calling the function in the R verified that threads was not being considered. I was to observe the options of the compiler R CMD SHLIB --help Usage: R CMD SHLIB [options] files | linker options Build a shared

How can one specify multiple extra flags to R CMD SHLIB? The example in R-exts section 5.5 MAKEFLAGS="CFLAGS=-O3" R CMD SHLIB *.c works for a single flag, but when I try MAKEFLAGS="CFLAGS=-g -O2 -Wall" R CMD SHLIB *.c only the first flag is used and the rest seem to be ignored (version 2.3.1, Mac OS X) -thomas Thomas Lumley Assoc. Professor, Biostatistics

Hi, I have some C++ code that I compiled into a dll for use in 32 bit R and would like to recompile for use in 64bit R. I thought it would be as easy as going to R-2.15.0\bib\x64 and running R CMD SHLIB mfregRF.c but that doesn't do anything. It doesn't give me any error messages, but it also doesn't create a shared (so) file. I just get the command prompt back. I also tried

Dear R People, in the R FAQ (in the R Programming section) it says ********************************************************************** How can I change compilation flags? =================================== Suppose you have C code file for dynloading into R, but you want to use `R CMD SHLIB' with compilation flags other than the default ones (which were determined when R was built).

I've been trying to create/load/call a dll from R-1.8.1 on Windows without much success. I've been able to at least load the library on FreeBSD (1.8.1). I've been able to perform this before using DLL that weren't created using RCMD SHLIB, but simply compiling under MS DevStudio. C:\optflikam>rcmd shlib --output=optflikam.dll as47.f as197.f flikam.c g77 -O2 -Wall -c as47.f

I've been trying to create/load/call a dll from R-1.8.1 on Windows without much success. I've been able to at least load the library on FreeBSD (1.8.1). I've been able to perform this before using DLL that weren't created using RCMD SHLIB, but simply compiling under MS DevStudio. C:\optflikam>rcmd shlib --output=optflikam.dll as47.f as197.f flikam.c g77 -O2 -Wall -c as47.f

Dear all, I am struggling to get the 'Rtools' tool chain to successfully build .dlls using the "R CMD SHLIB" method on my home Win7 64-bit (Ultimate) PC. Strangely I did get it working on my work PC (also Win7 64-bit but Enterprise) so I am totally at a loss as to what to do. When I type, "R CMD SHLIB foo.c" using the Command Prompt I get: make: *** No rule to make

A few years ago I used the following to compile a shared object that I wanted to call from R and it worked just fine. R CMD SHLIB -o ~/my_C/R.shared.so/cocite.mat.so cocite.mat.c Now when it is executed?I receive the following error message: make: *** No rule to make target `cocite.mat.o', needed by `/home/mkimpel/my_C/R.shared.so/cocite.mat.so'. Stop. I've consulted R CMD SHLIB

Dear People, I want to run gcc with optimisation turned on (-O2), and with -Wall (all warnings) enabled, when using R CMD SHLIB. When I do make, which is R CMD SHLIB -Wall -O2 cftp.c mcmc.c latticefn.c -lm in this case, I get faheem ~/research/cftp>make R CMD SHLIB -Wall -O2 cftp.c mcmc.c latticefn.c -lm make[1]: Entering directory `/home/faheem/research/cftp' gcc -I/usr/lib/R/include

Hello all, I'm trying hard to make R CMD SHLIB work on Windows XP (32-bit) - please note that I don't have the admin rights on the computer. In terms of setup, I have followed the procedure : => installed Rtools 2.14 => changed my path : PATH=C:\Trading\R\RTools\bin;C:\Trading\R\RTools\MinGW\bin;C:\Trading\R\R-2.14.1\bin\i386;C:\WINDOWS\system32;%OTHER_PATHS% But when I try R CMD

Hi, I've upgraded our server to the latest R version, everything went ok until I wanted to install RServe for our java clients. RServe needs the shared library which can be compiled using configure --enable-R-shlib. All went ok but after running make I got this error: gcc -shared -L/usr/local/lib64 -o libR.so Rembedded.o CConverters.o CommandLineArgs.o Rdynload.o Renviron.o RNG.o apply.o