similar to: generating a sequence

Dear helpRs Does anyone have an elegant way of doing the following: For a given numeric vector, e.g. vec <- c(3,2,6,4,7) Create a series of vectors where all but 1 of the values are replaced by 0's, e.g. vec.a <- c(3,0,0,0,0) vec.b <- c(0,2,0,0,0) vec.c <- c(0,0,6,0,0) vec.d <- c(0,0,0,4,0) vec.e <- c(0,0,0,0,7) I have looked at `replace', but can't think of a

Hi again Sorry, in looking again at sammon and isoMDS I see that they seem to do exactly what I want, except that they are non-metric, which means, as I understand it, that they relate the rank orders of the variables rather than the actual distances. Could I use these non-metric MDS packages even if my distances are metric? Thanks Karen -- Karen Kotschy Centre for Water in the Environment

Hello again I'm trying to put error bars onto a barplot. I've tried something that Bill Simpson suggested a while ago, ie: x<-c(1,2,3,4,5) y<-c(1.1, 2.3, 3.0, 3.9, 5.1) ucl<-c(1.3, 2.4, 3.5, 4.1, 5.3) lcl<-c(.9, 1.8, 2.7, 3.8, 5.0) plot(x,y, ylim=range(c(lcl,ucl))) arrows(x,ucl,x,lcl,length=.05,angle=90,code=3) #or segments(x,ucl,x,lcl) but I can't get it to work on a

Hi R users Does anyone out there have a better/quicker way of adding a factor column to a data frame based on levels of another factor? I have a (large) data frame consisting of records for individual plants, each represented by a unique ID number. The species of each plant is indicated in the column "species", which is a factor column with many different levels (species). There are

Dear R list Would anyone be able to tell me whether it is possible to do "enhanced multidimensional scaling" (enhanced MDS) in R? In other words, something that goes beyond "cmdscale" by iteratively improving the fit between observed dissimilarities and inter-object distances, using the KYST algorithm (Kruskal, 1964). I have found several implementations of non-metric MDS

Hi! The postscript device in 0.90 does not produce symbols (pch=) as it should. E.g.: postscript(file="test.ps",width=8,height=6.4,horizontal=FALSE) plot(1:10,1:10,pch=1:5) legend(1,9,letters[1:5],pch=1:5) dev.off() The result looks quite different compared to the X-windows version. The symbol 1 (pch=1) is much to small, while the other symbols seem to big. Is it a bug? How can I

Another question: Is it possible to move R objects from one directory to another without copying the whole .RData and .Rhistory files? (I'm running under Linux) Thanks Karen Kotschy Centre for Water in the Environment University of the Witwatersrand Johannesburg Tel: 011 716-2218 -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read

Hi Could somebody please explain the following to me: If x is a 10x10 matrix, typing x[3] prints all 10 values of column 3, although the length of the vector =1. Why? x[,3] and x[[3]] both give all 10 values of column 3, length=10. What is the difference between these two, actually? Thanks Karen Kotschy Centre for Water in the Environment Department of Botany University of the Witwatersrand

Dear R community Have just recently got back into R after a long break and have been amazed at how much it has grown, and how active the list is! Thank you so much to all those who contribute to this amazing project. My question: I am trying to calculate Mahalanobis distances for a matrix called "fgmatrix" >dim(fgmatrix) [1] 76 15 >fg.cov <- cov.wt(fgmatrix)

Dear R-List, I have a dataframe X containing factor f and numeric variable x1, x2, ... I want to create a new dataframe (or possibly a matrix) that gives statistics (e.g. sum) for the variables x1, x2, ... in each group defined by factor f. What is the simplest way to do this? I tried: attach(X) Z <- data.frame(f=levels(f),x1=as.vector(lapply(split(x1,f),sum))) and stumbled on: Error

Dear help list Does anybody know if it is possible to somehow tell R to let LaTeX handle the fonts for postscript plots produced by R? It is for a thesis and I have MANY figures. These are created by R scripts dynamically as the document is compiled, using the Make system. I see that I can `manually' specify the font family each time I call the postscript device, but I am looking for a

Hello, I have a data set with 9700 records, and 7 parameters. The data were collected for a survey of forest communities. Sample plots (1009) and species (139) are included in this data set. I need to determine how species are accumulated as new plots are considered. Basically, I want to develop a species area curve. I've included the first 20 records from the data set. Point

Does anyone know if an R plug-in exists for the GIS package ArcView running under Windows98 or NT? I know such a plug-in is available for S-PLUS. Thanks Karen Kotschy Centre for Water in the Environment Department of Botany University of the Witwatersrand Johannesburg South Africa Tel : +2911 716-2218 Postal address: P/Bag 3 P.O Wits 2050 South Africa

Dear R users, I am using Sweave. I would like to use the width option for the graphics : \begin{figure}[h!] \centering \includegraphics[width=0.7\textwidth]{x} \end{figure} How do I get this ? Thank you very much, Randall [[alternative HTML version deleted]]

Dear list, I want to perform a biplot, using customized titels for the x and y axis. Setting xlab="" and ylab="" resulted in an error, e.g.: > data(USArrests) > biplot(princomp(USArrests),xlab="",ylab="") Error in biplot.default(t(t(scores[, choices])/lam), t(t(x$loadings[, : length of dimnames[1] not equal to array extent > How do I

Dear all, first, I would like to thank R-core team for making so a great software available. Thank you all, really! Using R (1.0.0) on a Win98 platform, I need an x-server to run xgobi (through R xgobi interface). I've been using a MI/X server but trying to upgrade I noticed that MI/X is no longer available for free. Similarly, eXceed is available at evaluation version (for a limited time

Dear R users, Does anyone have a function for putting a legend on an image plot? I couldn't locate an R equivalent of image.legend....has anyone written such a thing? kind regards andy --------------------------------------------------------------------- J. Andy Royle, U.S. Fish and Wildlife Service - Office of Migratory Bird Management; 11510 American Holly Drive , Laurel, MD

Dear R users I have a question which is only partly related to R, but I'm sending it to this list in the hope that someone with a better statistical background than mine will be kind enough to help me. It concerns multiple comparison testing in ANOVA. I know this subject has been raised before on this list, and I have looked through the relevant messages and read the article in

Hi I asked a while ago about multiple comparison tests for use with multi--way ANOVAs. Thanks to all those who replied and gave me some ideas and functions. What I ended up doing was writing my own function for Tukey's HSD test (ref: Zar's Biostatistics pg 186-190), as this was the procedure I could best understand. I've included my function here for those who may be interested.

Dear R community I sent a message out a while ago asking for help with multiple comparison tests for ANOVA's, but haven't had any response yet. I'm sending a final desperate plea. If I can't get this done in R I'm going to have to redo a whole lot of stuff in a commercial package, which I'm REALLY not keen to do! My problem is how to implement these tests in R. Below