Displaying 20 results from an estimated 400 matches similar to: "[PATCH] Implement getgeo for Xen virtual block device."
2010 Jan 29
2
Suppress output from getGEO
Dear R-ers,
I am using getGEO to download expression data from the Gene Expression
Omnibus. With default settings, when a file is downloaded and parsed,
lots of dotted lines are printed in the terminal, like this:
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
..........
2008 Jan 23
1
[PATCH] virtio_blk: provide getgeo
Rusty,
I currently try to make my guest boot from an virtio root device
without having an external kernel. Some of the tools that I tried
expect HDIO_GETGEO to work. The most interesting value is likely
the geo.start value to get the offset of a partition. This value
is filled by block/ioctl.c if fops->getgeo is set. This patch also
fills in some standard values for heads, sectors and
2008 Jan 23
1
[PATCH] virtio_blk: provide getgeo
Rusty,
I currently try to make my guest boot from an virtio root device
without having an external kernel. Some of the tools that I tried
expect HDIO_GETGEO to work. The most interesting value is likely
the geo.start value to get the offset of a partition. This value
is filled by block/ioctl.c if fops->getgeo is set. This patch also
fills in some standard values for heads, sectors and
2008 Feb 22
1
[2.6 patch] make xen-blkfront.c:blkif_getgeo() static
This patch makes the needlessly global blkif_getgeo() static.
Signed-off-by: Adrian Bunk <bunk@kernel.org>
---
6f34bfdbb8c24e06d982ccaccd24c25dba5b1956 diff --git a/drivers/block/xen-blkfront.c b/drivers/block/xen-blkfront.c
index 9c6f3f9..ae7ee16 100644
--- a/drivers/block/xen-blkfront.c
+++ b/drivers/block/xen-blkfront.c
@@ -136,7 +136,7 @@ static void blkif_restart_queue_callback(void
2010 Jan 29
0
[BioC] Suppress output from getGEO
some time ago i communicated the same issue to sean, and i'm very glad he
has improved the package -- thanks!
i'm purposefully posting to r-devel rather than to bioconductor. i think
that download.file could be improved to avoid this sort of spamming output
seen previously with getGEO. currently, it prints dots (when it does) in
5 10-packs per line, line after line. instead, it could
2010 Feb 11
1
Reading raw intensity data from getGEO's gse object
Hello, I am trying to download a SOFT matrix file for GSE series to extract
raw intensity data.
gse<- getGEO('GSExxxx', AnnotGPL=T)
However, I am not able to use the function Table(gse), which returns the
following error
>>>Error in function (classes, fdef, mtable) :
unable to find an inherited method for function "Table", for signature
"GSE"
If I
2012 Aug 02
0
[PATCH 1/3] ALPHA: make sector size dynamic in extlinux
This is part of some patches to support sectors > 512.
Currently I'm able to boot a Ubuntu kernel but seems that mboot is not working for some reason.
This patch try to fix first stage of extlinux bootloader but have some problems with ADV
Signed-off-by: Frediano Ziglio <frediano.ziglio at citrix.com>
---
dos/syslinux.c | 2 +-
extlinux/main.c | 36
2004 Sep 12
0
Help needed: division by zero in winword etc.
Hi, in quite a few programs i can not browse the
filesystem when opening a "listbox"; to be more clear:
for example when i do in winword Open and the listbox
appears, and i try to open the pull down menu winword
just quits(without an error message in wine). In
another program like "Camel join" it quits as soon as
i go up to the level of "my computer" with a message
2020 Apr 30
0
[PATCH v3] virtio-blk: handle block_device_operations callbacks after hot unplug
On Wed, Apr 29, 2020 at 05:53:45PM +0100, Stefan Hajnoczi wrote:
> A userspace process holding a file descriptor to a virtio_blk device can
> still invoke block_device_operations after hot unplug. This leads to a
> use-after-free accessing vblk->vdev in virtblk_getgeo() when
> ioctl(HDIO_GETGEO) is invoked:
>
> BUG: unable to handle kernel NULL pointer dereference at
2020 May 14
0
[PATCH AUTOSEL 5.6 32/62] virtio-blk: handle block_device_operations callbacks after hot unplug
From: Stefan Hajnoczi <stefanha at redhat.com>
[ Upstream commit 90b5feb8c4bebc76c27fcaf3e1a0e5ca2d319e9e ]
A userspace process holding a file descriptor to a virtio_blk device can
still invoke block_device_operations after hot unplug. This leads to a
use-after-free accessing vblk->vdev in virtblk_getgeo() when
ioctl(HDIO_GETGEO) is invoked:
BUG: unable to handle kernel NULL pointer
2020 May 14
0
[PATCH AUTOSEL 4.19 22/31] virtio-blk: handle block_device_operations callbacks after hot unplug
From: Stefan Hajnoczi <stefanha at redhat.com>
[ Upstream commit 90b5feb8c4bebc76c27fcaf3e1a0e5ca2d319e9e ]
A userspace process holding a file descriptor to a virtio_blk device can
still invoke block_device_operations after hot unplug. This leads to a
use-after-free accessing vblk->vdev in virtblk_getgeo() when
ioctl(HDIO_GETGEO) is invoked:
BUG: unable to handle kernel NULL pointer
2020 May 14
0
[PATCH AUTOSEL 4.14 31/39] virtio-blk: handle block_device_operations callbacks after hot unplug
From: Stefan Hajnoczi <stefanha at redhat.com>
[ Upstream commit 90b5feb8c4bebc76c27fcaf3e1a0e5ca2d319e9e ]
A userspace process holding a file descriptor to a virtio_blk device can
still invoke block_device_operations after hot unplug. This leads to a
use-after-free accessing vblk->vdev in virtblk_getgeo() when
ioctl(HDIO_GETGEO) is invoked:
BUG: unable to handle kernel NULL pointer
2020 May 14
0
[PATCH AUTOSEL 5.4 29/49] virtio-blk: handle block_device_operations callbacks after hot unplug
From: Stefan Hajnoczi <stefanha at redhat.com>
[ Upstream commit 90b5feb8c4bebc76c27fcaf3e1a0e5ca2d319e9e ]
A userspace process holding a file descriptor to a virtio_blk device can
still invoke block_device_operations after hot unplug. This leads to a
use-after-free accessing vblk->vdev in virtblk_getgeo() when
ioctl(HDIO_GETGEO) is invoked:
BUG: unable to handle kernel NULL pointer
2007 Jan 31
0
A GSE data in the web of ncbi, GSE3524 cannot be open correctly
Hi, all
I met a problem to query GSE3524, which cannot be open on my computer. I
hope some of you would be kind to give me some advice. Thanks!
The code is as follow:
##################
library(GEOquery)
gsename="GSE3524"
gse=getGEO(gsename)
##################
The error information follows as
2014 Oct 10
2
Problemas al intentar cargar datos
Hola, buenas tardes,
Hace unos dias que intento cargar unos datos de microarrays del ncbi con
versión de R 2.15.2 de 32 bits en windows xp.
he utilizado el siguiente codigo:
library(Biobase)
library(GEOquery)
library(limma)
gset <- getGEO("GSE6536", GSEMatrix =TRUE)
Al hacerlo me da este error:
"Error in function (type, msg, asError = TRUE) : couldn't connect to
2020 Apr 29
2
[PATCH v3] virtio-blk: handle block_device_operations callbacks after hot unplug
A userspace process holding a file descriptor to a virtio_blk device can
still invoke block_device_operations after hot unplug. This leads to a
use-after-free accessing vblk->vdev in virtblk_getgeo() when
ioctl(HDIO_GETGEO) is invoked:
BUG: unable to handle kernel NULL pointer dereference at 0000000000000090
IP: [<ffffffffc00e5450>] virtio_check_driver_offered_feature+0x10/0x90
2020 Apr 29
2
[PATCH v3] virtio-blk: handle block_device_operations callbacks after hot unplug
A userspace process holding a file descriptor to a virtio_blk device can
still invoke block_device_operations after hot unplug. This leads to a
use-after-free accessing vblk->vdev in virtblk_getgeo() when
ioctl(HDIO_GETGEO) is invoked:
BUG: unable to handle kernel NULL pointer dereference at 0000000000000090
IP: [<ffffffffc00e5450>] virtio_check_driver_offered_feature+0x10/0x90
2020 Apr 30
3
[PATCH v4] virtio-blk: handle block_device_operations callbacks after hot unplug
A userspace process holding a file descriptor to a virtio_blk device can
still invoke block_device_operations after hot unplug. This leads to a
use-after-free accessing vblk->vdev in virtblk_getgeo() when
ioctl(HDIO_GETGEO) is invoked:
BUG: unable to handle kernel NULL pointer dereference at 0000000000000090
IP: [<ffffffffc00e5450>] virtio_check_driver_offered_feature+0x10/0x90
2020 Apr 30
3
[PATCH v4] virtio-blk: handle block_device_operations callbacks after hot unplug
A userspace process holding a file descriptor to a virtio_blk device can
still invoke block_device_operations after hot unplug. This leads to a
use-after-free accessing vblk->vdev in virtblk_getgeo() when
ioctl(HDIO_GETGEO) is invoked:
BUG: unable to handle kernel NULL pointer dereference at 0000000000000090
IP: [<ffffffffc00e5450>] virtio_check_driver_offered_feature+0x10/0x90
2020 Apr 28
0
[PATCH v2] virtio-blk: handle block_device_operations callbacks after hot unplug
On Tue, Apr 28, 2020 at 03:30:09PM +0100, Stefan Hajnoczi wrote:
> A userspace process holding a file descriptor to a virtio_blk device can
> still invoke block_device_operations after hot unplug. For example, a
> program that has /dev/vdb open can call ioctl(HDIO_GETGEO) after hot
> unplug to invoke virtblk_getgeo().
which causes what? a use after free?
>
> Introduce a