Displaying 7 results from an estimated 7 matches for "yseq".
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seq
2003 Feb 14
2
matrix from sequences
Hi all,
I have a data frame with sequences of x and y from a map. I would like to
know it both ways:
1. How to make a matrix from that;
2. how to make a data frame of all points in a map.
Probably it is a silly question, but please tell me where to read about it
or tell me how to do it.
Miha Staut
2003 Sep 08
2
Re: clustering polypeptide sequences
...00000
b0002 0.035122 0.065854
b0003 0.024193 0.070968
b0004 -0.096729 0.084112
b0005 -0.973469 0.091837
b0006 -0.402713 0.108527
b0007 0.680672 0.123950
b0008 -0.209779 0.072555
b0009 -0.013334 0.046154
b0010 0.952128 0.143617
suppose you have these data into a data frame called myseqs [see the R
documentation in how to upload these data, you can try > myseqs <-
edit(read.table()) ]
# you need to load the necessary libraries
library(mva) # basic clustering
library(cluster) # more clustering algorithms
# then you need to calculate the 'distances' betw...
2003 Jul 24
1
geoR size limit problem
Hi all,
I tried to produce some kriged surfaces with geoR (latest version). The size
of the grid should be around 900 x 650 cells (what I find is not a very big
grid), and the number of points is around 2500. The command krige.conv
stopped after arround 5 min saying it can not allocate a vector with around
1.5 billion units. Sounds reasonable.
Is there a workaround? How would I partition the
2006 Mar 18
0
No subject
vector with a sequence starting from 1 to sum of all the values of the
raster data and length(the same length as the sum). In another data frame
(G) I have got a vector with the environment variables (G$xseq and G$yseq).
How can I combine the x and y coordinates with tha raster data to form a
data.frame?
length(G$xseq)=3099
length(G$yseq)=5032
rastername=rst
length(rst)=(3099*5032)
Next question:
I would like to broaden every unit in rst in the following way:
rst2<-c(rep(rst[1:1], times=rst[1:1]), rep(rst[2...
2001 Dec 12
1
can't vectorize an expression
Dear R support network
I have a problem that is driving me crazy.
I have a dataframe with about 74000 landscapes which I call "land". A
landscape is a 2km -by- 2km square.
Land has three columns: land$lat, land$long, and land$description.
The last one holds a NON-unique (integer) description of each
landscape. There are maybe 100 distinct descriptions. Identifying
landscapes that
1999 Sep 20
3
image legend
Dear R users,
Does anyone have a function for putting a legend on an image
plot? I couldn't locate an R equivalent of image.legend....has
anyone written such a thing?
kind regards
andy
---------------------------------------------------------------------
J. Andy Royle, U.S. Fish and Wildlife Service - Office of Migratory
Bird Management; 11510 American Holly Drive , Laurel, MD
2000 Feb 07
4
Segmentation fault, devPS.c, 0.99.0 (PR#413)
Full_Name: Roger Bivand
Version: 0.99.0
OS: RH Linux 6.1
Submission from: (NULL) (158.37.60.152)
I am working on an interface between R and the GRASS geographical information
system,
written in R, with no dynamically loaded code. I have written full examples, and
tested
then under R 0.90.1, both by entering example() for each function and R CMD
check, both
of which worked without problem.
Under