search for: survival4

I have built R-0.50-a4 on HP9000/C160-hpux10.2 with gcc (cc for libs). When I try library(survival4) Error in pos.to.env(pos) : invalid "pos" argument And it does not load. Other libs seem to work. I tested integrate (has f2c translated c), polynomial. Is this a problem with my system only??? TIA osman =-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-= r-hel...

The new code seems to have broken various things. Autoloading of libraries doesn't seem to work: > library(survival4) Autoloading required library: splines Error in pos.to.env(pos) : invalid "pos" argument > search() [1] ".GlobalEnv" "library:survival4" "library:date" [4] "library:base" The coxph function the the library survival4 doesn...

The new code seems to have broken various things. Autoloading of libraries doesn't seem to work: > library(survival4) Autoloading required library: splines Error in pos.to.env(pos) : invalid "pos" argument > search() [1] ".GlobalEnv" "library:survival4" "library:date" [4] "library:base" The coxph function the the library survival4 doesn...

Hi there, Here is a record of an R session: > library(survival4) Autoloading required package: splines > coxph(Surv(c(1,2,3,4), c(1,1,1,1)) ~ c(1,0,1,0)) Error in .C("coxfit2", iter = as.integer(iter.max), as.integer(n), as.integer(nvar), : C/Fortran function not in load table Why is "coxfit2" not in the load table? How do I fix it? Sy...

...subdir called contrib, and R INSTALL from there. I have R-0.61.1 Alpha Dec21 1997. Without restored data they work OK. Osman > ---------- > From: Goran Brostrom[SMTP:gb at stat.umu.se] > Sent: Tuesday, January 27, 1998 3:07 AM > To: r-help at stat.math.ethz.ch > Subject: R-beta: survival4 > > > I have installed R (latest) on two machines running RedHat Linux, > Versions 4.2 and 5.0, respectively. In both cases I get the > following error: Starting R in an empty (ie, no .RData file) folder > is fine, coxph works, but if I quit, save the work sheet and > start...

I installed the latest version of R (Version 0.50 Alpha-4) and it breaks survival4 as follows (it worked fine under Version 0.50 Alpha-3) R> library(survival4) Autoloading required library: splines R> survfit(Surv(runif(25),rbinom(25,1,0.4)) ~ 1) Error in eval(frame, data)[subset, , drop = FALSE] : incorrect number of dimensions Thanks E. S. Venkatraman =-=-=-=-=-=-=-=-...

Has ":=" been eliminated? It seems to be gone from the most current snapshot, which makes loading survival4 fail (it contains 6 `:=' assignments in header.R). -k =-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=- r-devel mailing list -- Read http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html Send "info", "help", or "[un]subscribe" (in the "...

Windows 9*/NT version, on an NT box R 0.63.0 Beta (Nov 13, 1998) > library(survival4) > test <- function(x,d) { survfit(Surv(x,d) ~1) } > test( rexp(50), sample(c(0,1), size=50, replace=T) ) Error: Object "x" not found > Other functions like in the ctest library works out OK, the x and d got passed to the inner function. And here it did not got passed...

I downloaded binary of survival5 for windows95 (also the splines, date). The function survsum shows up in content, has a help page, but the function itself is missing. Can we cut and paste the survsum from survival4 ? Mai Zhou P.S. I am not picking on R, not even complaining. I think R is great and I am try to contribute my (small) part to make it even better in way of bug report (or may be not a bug, but just differences to previous release). I thought this is a given for people on this list. But was...

..., trying to install "R-ctest-0.9.R16-1.ppc.rpm" and "R-splines-2.0.R3-3.ppc.rpm" rpms currently in the linuxppc binary download directory results in error messages saying that files in these rpms conflict with files from R-base 1.01-1. Of course, "R-rpart" and "R-survival4" then also can't be installed because the above aren't installed. Should I force install "R-ctest" and "R-splines"? I'm afraid to break something in the base install without knowing it. Haven't found anything in the help archives about this one. Many thank...

....65.1 The fonctionnality to upgrade and install packages is a very great idea. But the file PACKAGES at http://www.ci.tuwien.ac.at:80/R/src/contrib/ is outdated : 3 of the 4 packages i try to install failed with a 404 not found : the package version are newer than the entry in the PACKAGES file : survival4 survival4_1.4-0.tar.gz Version: 1.1-0 rpart rpart_1.0-7.tar.gz Version: 1.0-6 But it's really a great idea. Another remark, the package installed with R core, and old packages have no versionning number : installed.packages() [1,] "addreg" "/usr/local/lib/R/library"...

Hi I always have following error message when I try to read a big ascii-file: > inzp<-read.data() > Error: heap memory (1953 Kb) exhausted [needed 0 Kb more] read.data() is a small function that reads the ascii-file. When I cut the ascii-file to a small one I don't have this problem. Can I extend this 'heap memory' for reading big data files? How? I'm working with R on a

...f Statistics (e1071), TU Wien *) fracdiff Fractionally differenced ARIMA(p,d,q) models *) gee Generalized Estimating Equation models *) jpn Plot Japan's coast line and prefectures *) oz Plot Australia's coast line and state boundaries *) splines Regression spline functions *) survival4 Survival analysis Package: r-doc Status: install ok installed Priority: optional Section: local Maintainer: Kurt Hornik <Kurt.Hornik at ci.tuwien.ac.at> Version: 0.50b7-1 Depends: r-base Description: Documentation for R in dvi and HTML format. I thought I would play around with the...

Hi, I'm using the rsept for WINDOWS 95 (with modified men?, and "fixed" survival4). See the Ennapadam Venkatraman's example made in date 35/07/97 19.02 Ennapadam Venkatraman wrote: > library(splines) > library(survival4) > xx <- NULL > xx$ftim <- exp(-runif(100)) > xx$ctim <- 2*runif(100) > xx$sts <- 1*(xx$ftim <= xx$ctim) > xx$otim <-...

Can anybody explain what is happening? I am using RedHat Linux 5.0 with the latest Martyn Plummer RPM's installed, both at home and at the office. At home "survival4" is (still) working OK. At the office all the components ('survfit', 'survdiff', 'coxph, etc..) stop with an error message that they can't 'find' or 'load' the C binaries: i.e. '.C("survfit2",....)'. Immediately after installing every...

...nction that generates data and tries to apply the survfit within it. I have tried: function(..){ x ..... survfit(Surv(tim,sts) ~ grp, data = x, envir = sys.frame(sys.parent())) } but I still get "Error: Object "x" not found". Is there a fix? (I use R-0.63.2 with the current survival4 package) Thanks E. S. Venkatraman -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html Send "info", "help", or "[un]subscribe" (in the "body", not the subj...

Hi, the ratetables package on CRAN contains no author/maintainer information whatsoever and I cannot remember who submitted it ... is the creator out there on this list? The DESCRIPTION file is missing (otherwise I wouldn't have problems with finding the author) ... Fritz -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-devel mailing list -- Read

I've put all ``current'' add-on packages into CRAN's source/contrib tree and created an INDEX file (attached below). As you can see, currently we have acepack bootstrap ctest date e1071 fracdiff gee jpn snns splines survival4 (Yes, e1071 and jpn are new ... more on the latter in a later mail.) In the near future, I am hoping for the following: oz (Bill Venables said should work without problems ...) polynom (Has been used as a test bed for the new group methods in R 0.50, so should only be a matter of packagi...

...e message of the type "symbol xxxx not found in crtdll.dll". The Win32s version can be found in the file windows\system\win32s.ini. (2) To load a package, you should use only the first 8 characters of the name, i.e., use > library(survival) not > library(survival4) (3) The system() command doesn't work. I have no time now to understand why so I put a dummy definition in library/Rprofile. ----------------------------------------------------------------------------- Remember that this distribution is experimental. So, use it at your own risk. T...

...oftware for the second edition, as a new more `R friendly' third edition is due out in July. The software for that is now available for pretest (including for R-0.64 on UNix and Windows) at http://www.stats.ox.ac.uk/pub/MASS3 It is almost completely backwards compatible (just no support for survival4) with eariler versions but has new datasets and functions. Some, such as ppr and lqs, are already in R. Windows versions: ================= I have split the Windows contributed collection into current and rw063x sections: the mirroring on CRAN caught the middle of the change but should be comple...