Displaying 5 results from an estimated 5 matches for "revmap".
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remap
2009 Dec 24
1
Question to use R plot GO pie chart
Hi,
I have a list of IPI gene IDs. I want to find out whether there is a
package which can map the gene ontology to these IPIs, and plot the
pie chart to demonstrate the molecular function distributions.
The input is like the following gene IPI IDs:
IPI:IPI00008860.1|SWISS-PROT:Q9BXJ4-1|TREMBL:Q542Y2|ENSEMBL:ENSP00000231338;EN
2018 Nov 12
2
[monorepo] Downstream branch zipping tool available
...mments. It was enough to get us going and I'm hopeful it will be
useful for others. It seems to do the right thing with our repositories
but YMMV. Feel free to open PRs with bug fixes. :)
To get this to work, you'll need to apply a PR for
migrate-downstream-fork.py to fix issues with --revmap-out [3].
-David
[1] https://github.com/jyknight/llvm-git-migration/blob/master/migrate-downstream-fork.py
[2] https://github.com/jyknight/llvm-git-migration/pull/2/commits/a3b44a294c20f1762cb42b5794e6130c5b27f22d
[3] https://github.com/jyknight/llvm-git-migration/pull/1
2005 Sep 08
4
Hg problem?
...line
938, in pull
r = repo.pull(other)
File "/usr/lib64/python2.3/site-packages/mercurial/hg.py", line 1404,
in pull
return self.addchangegroup(cg)
File "/usr/lib64/python2.3/site-packages/mercurial/hg.py", line 1526,
in addchangegroup
n = fl.addgroup(getgroup(), revmap, tr)
File "/usr/lib64/python2.3/site-packages/mercurial/revlog.py", line
517, in addgroup
raise "unknown base %s" % short(chain[:4])
unknown base 4ff10995
transaction abort!
rollback completed
Jun
---
Intel Open Source Technology Center
_________________________________...
2011 Sep 13
2
GO & Protein Complex Analysis for Homo sapiens
Dear All,
I need to fetch GO ontologies for Homo sapiens with their mappings to
corresponding Uniprot identifiers. I would be using this information to
compare result from a clustering algorithm with existing protein complexes.
This would be a test to check how the clustering algorithm accurately
captures GO terms with respect to the known protein complexes. Can anyone
suggest a simple workflow
2018 Nov 05
2
RFC: Dealing with out of tree changes and the LLVM git monorepo
Well shoot, you beat me to it. :)
I've been working on a similar tool but it's not ready yet. Looking
forward to trying yours!
-David
James Y Knight via llvm-dev <llvm-dev at lists.llvm.org> writes:
> I'm about to post exactly this tool -- I've been testing it on the
> CHERI forks of llvm/clang/lld (lots of history and merges and stuff