search for: nmath

I build R-beta on AIX5.2 is failed. make[3]: Entering directory `/home/nakama/Rbeta/R-beta/src/nmath' xlc_r -I. -I../../src/include -I../../src/include -I/usr/local/include -I/opt/freeware/include -DHAVE_CONFIG_H -q64 -I/usr/local/include -I/opt/freeware/include -O2 -D_ALL_SOURCE -D_LINUX_SOURCE_COMPAT -c mlutils.c -o mlutils.o "nmath.h", line 50.9: 1506-213 (S) Macro name calloc c...

Hi: I am writing a C program which need a gamma random number generator. I download the source file of R and compile, make it myself. There is a "rgamma.c" function in the installing directory of R("/home/zhliu/Backup/R-2.0.1/src/nmath/rgamma.c"). My question is how to call this function in my own program which is in another directory. I can not copy this "rgamma.c" to my working directory and use #inclucde"rgamma.c" because in the file "rgamma.c", it includes other header files. Or I can use ma...

Full_Name: Tim Middelkoop Version: 0.64.0 OS: IRIX 6.3 on O2 Submission from: (NULL) (128.119.88.192) Various IRIX complile issues src/nmath/pnt.c IRIX cc does not like double negatives Makeconf,config.site,etc/Makeconf f77 pic hack, should change Makeconf.in or other... change -PIC with -KPIC enjoy, tim... === diff -ru orig/R-0.64.0/src/nmath/pnt.c R-0.64.0/src/nmath/pnt.c --- orig/R-0.64.0/src/nmath/pnt.c Wed Apr 7 02:45:48...

Hi, I am wondering where the library file for R's nmath routines are? Doing a search on libR gave me the following: /usr/lib/libRKC16.so.1.2.0 /usr/lib/libRKC.so.1.2.0 /usr/lib/R/lib/libRlapack.so /usr/lib/R/lib/libR.so /usr/lib/libRKC.so.1 /usr/lib/libRKC16.so.1 None of these have the functions in nmath. Any help? Many thanks and best wishes! GT

Dear all, I'm trying to use the as a standalone package the nmath sources. In R-1.4.1/src/nmath/standalone, in linux operating system I made 'make shared' to obtain libRmath.so. then I copied the dir standalone, where there is libRmath.so in /usr/local. I tried to compile test.c with cc test.c but I obtain this error message /tmp/ccsTxu7U.o: In functio...

Hi ! I have again problem with nmath standalone sources package. Following the suggestion of Reid, I did control that /usr/local, in which I copied the dir standalone, is listed in /etc/ld.so.conf. However, because of my big ignorance, I don't understand how I have to do the linkage to Rmath during the compilation of a source....

...th.h?, as a standalone library 'libRmath? under Unix and Windows. (This includes the functions documented in Section 5.7 [Numerical analysis subroutines], page 61 as fromthat header file.) The library is not built automatically when R is installed, but can be built in the directory 'src/nmath/standalone? in the R sources: see the file 'README? there. To use thecode in your own C program include #define MATHLIB_STANDALONE #include <Rmath.h> and link against '-lRmath?. There is an example file 'test.c?." Have I to do: gcc -lRmath test.c ? In this case I receive...

Thanks Ben for verifying the issue. It is always reassuring to hear when others can reproduce the problem. I wrote a small patch that fixes the issue (https://github.com/r-devel/r-svn/pull/11): diff --git a/src/nmath/qnbinom.c b/src/nmath/qnbinom.c index b313ce56b2..d2e8d98759 100644 --- a/src/nmath/qnbinom.c +++ b/src/nmath/qnbinom.c @@ -104,6 +104,7 @@ double qnbinom(double p, double size, double prob, int lower_tail, int log_p) /* y := approx.value (Cornish-Fisher expansion) : */ z = qnorm(p, 0.,...

Hi: I followed the README in src/nmath/standalone/ to make the use the command "make shared" to make the libRmath.so file. I also add the directories containg libRmath.so to LD_LIBRARY_PATH by using command "export D_LIBRARY_PATH=$LD_LIBRARY_PATH:$/home/zhliu/Backup/R-2.0.1/src/nmath/standalon e " However,...

...ory efficiency. The idea is basically the same. I use the same recursion as original author used with one slight modification. I am generating Wilcoxon SignRank density from the beginning (for n=2,3,...) with the help of recursion formula. What is changed? There is no need for SINGRANK_MAX in src/nmath/nmath.h anymore. Only functions: static void w_free() void signrank_free() static void w_init_maybe(int n) static double csignrank(int k, int n) in src/nmath/signrank.c have been altered. There was no change to dsignrank, psignrank, ... I've tried to make as little changes as possible. So, to...

Hi: I followed the README in src/nmath/standalone/ to make the use the command "make shared" to make the libRmath.so file. I also add the directories containg libRmath.so to LD_LIBRARY_PATH by using command "export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$/home/zhliu/Backup/R-2.0.1/src/nmath/standalon e " However, whe...

Hi, In src/nmath/dgamma.c the comment at the top says * DESCRIPTION * * Computes the density of the gamma distribution, * * 1/s (x/s)^{a-1} exp(-x/s) * p(x;a,s) = ----------------------- * (a-1)! * * where `s' is the scale (= 1/lambda in...

Dear All, I am having problems making and using the standalone library, after succesfully installing R from the tar.gz file (I am using Linux, with R-patched, but I have similar problems with R-devel). First, when I do: root at ligarto:/usr/lib/R-patched/src/nmath/standalone > make .... ar: mlutils.o: No such file or directory make[1]: *** [libRmath.a] Error 1 make[1]: Leaving directory `/usr/lib/R-patched/src/nmath/standalone' make: *** [archive] Error 2 I tried directly giving the names of the object files to ar, and it seems to work... but not...

At the top of src/nmath/qnorm.c it is stated: * Copyright (C) 1998 Ross Ihaka * Copyright (C) 2000--2005 The R Development Core Team * based on AS 111 (C) 1977 Royal Statistical Society * and on AS 241 (C) 1988 Royal Statistical Society The routine is in fact an f2c'd version of AS241 from StatLib: h...

Hi ! 1) First question. Excuse me for trouble with the same question. I still have problems with the compilation of test.c in src/nmath/standalone. I did follow the instructions you gave me but I still receive this message [root at my standalone]# cc -o test test.c -L/usr/local -lRmath /usr/local/libRmath.so: undefined reference to `log' /usr/local/libRmath.so: undefined reference to `sqrt' /usr/local/libRmath.so: undefi...

...39;. installing C headers make --no-print-directory -C ../extra/intl OPTFLAGS='-O3 -Wall -pedantic -std=gnu99' -f Makefile.win make --no-print-directory -C ../appl OPTFLAGS='-O3 -Wall -pedantic -std=gnu99' FOPTFLAGS='-O3 -Wall' -f Makefile.win make --no-print-directory -C ../nmath OPTFLAGS='-O3 -Wall -pedantic -std=gnu99' -f Makefile.win make --no-print-directory -C ../main OPTFLAGS='-O3 -Wall -pedantic -std=gnu99' FFLAGS='-O3 -Wall' -f Makefile.win make --no-print-directory -C ./graphapp OPTFLAGS='-O3 -Wall -pedantic -std=gnu99' make --no-pri...

...._t.*/TRUE, /*log_p*/FALSE)) < p` is FALSE. I think the solution is to move the update of y before the if. However, I need to make this slightly awkward check if incr == 1, so that the return in line 123 and the do-while block at the end of qnbinom() do not need to be modified. diff --git a/src/nmath/qnbinom.c b/src/nmath/qnbinom.c index b313ce56b2..16845d9373 100644 --- a/src/nmath/qnbinom.c +++ b/src/nmath/qnbinom.c @@ -49,10 +49,18 @@ do_search(double y, double *z, double p, double n, double pr, double incr) { if(*z >= p) { /* search to the left */ for(;;) { + y = fmax2(0,...

...ntvector.o printutils.o qsort.o random.o regex.o registration.o relop.o saveload.o scan.o seq.o serialize.o size.o sort.o source.o split.o sprintf.o startup.o subassign.o subscript.o subset.o summary.o sysutils.o unique.o util.o version.o vfonts.o xxxpr.o ../unix/libunix.a ../appl/libappl.a ../nmath/libnmath.a -xlic_lib=sunperf -lsunmath -Rreg -R/opt/SUNWspro/lib/sse2:/opt/SUNWspro/lib -L/opt/SUNWspro/lib/sse2 -L/opt/SUNWspro/prod/lib/sse2 -L/opt/SUNWspro/prod/lib -L/usr/ccs/lib -lfui -lfai -lfsu -lsunmath -lmtsk -lm ../extra/zlib/libz.a ../extra/bzip2/libbz2.a ../extra/pcre/libpcre.a ../ext...

Hello I would like to see the algorithm that R uses to generate density functions for several distributions (i.e. Normal,Weibull, etc). I tried: >dnorm function (x, mean = 0, sd = 1, log = FALSE) .Internal(dnorm(x, mean, sd, log)) <environment: namespace:stats> How can I see the code used for densities? Thanks!

.../include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -D__NO_MATH_INLINES -g -c rbinom.c -o rbinom.o "rbinom.c", line 60: operand must have real floating type: op "isfinite" cc: acomp failed for rbinom.c Following patch may solve this problem. *** R-2.0.1.orig/src/nmath/rbinom.c Mon Nov 15 21:33:01 2004 --- R-2.0.1/src/nmath/rbinom.c Sun Apr 3 00:19:52 2005 *************** *** 57,63 **** n = floor(nin + 0.5); if (n != nin) ML_ERR_return_NAN; ! if (!R_FINITE(n) || !R_FINITE(pp) || /* n=0, p=0, p=1 are not errors <TSL>*/...