search for: lsunmath

...ed.o Trunmed.o dblcen.o distance.o hclust-utils.o nls.o HoltWinters.o PPsum.o arima.o burg.o filter.o mAR.o pacf.o starma.o port.o family.o bsplvd.o bvalue.o bvalus.o loessf.o ppr.o qsbart.o sbart.o sgram.o sinerp.o sslvrg.o stxwx.o hclust.o kmns.o eureka.o stl.o portsrc.o -xlic_lib=sunperf -lsunmath -Rreg -R/mounts/devel/SUNWspro/lib/amd64:/opt/SUNWspro/lib/amd64 -L/mounts/devel/SUNWspro/prod/lib/amd64 -L/lib/amd64 -L/usr/lib/amd64 -lfui -lfai -lfsu -lsunmath -lmtsk -lm ld: fatal: file bsplvd.o: wrong ELF class: ELFCLASS32 ld: fatal: File processing errors. No output written to stats.so *** Er...

...plotmath.o print.o printarray.o printvector.o printutils.o random.o regex.o relop.o saveload.o scan.o seq.o size.o sort.o source.o split.o subassign.o subscript.o subset.o summary.o unique.o util.o version.o vfonts.o xxxpr.o ../unix/libunix.a ../appl/libappl.a ../nmath/libnmath.a -xlic_lib=sunperf -lsunmath -R/opt/SUNWspro/lib -L/opt/SUNWspro/lib -L/opt/SUNWspro/WS6U1/lib -L/usr/ccs/lib -L/usr/lib -lfui -lfai -lfai2 -lfsumai -lfprodai -lfminlai -lfmaxlai -lfminvai -lfmaxvai -lfsu -lsunmath -lm -lz -lnsl -lsocket -lreadline -ldl -ltermcap -lm -xlic_lib=sunperf Undefined first ref...

...dalign" export CXX="CC" export CXXFLAGS="-xO5 -xlibmil -dalign" Config.log reports the following: configure:19929: checking for sgemm_ in -lsunperf configure:19966: cc -xarch=v9 -o conftest -xO5 -xlibmil -dalign -I/usr/local/include -L/usr/local/ lib conftest.c -lsunperf -lsunmath -lnsl -lsocket -lreadline -ldl -ltermcap -lm -L/usr/local/lib -lreadline -ldl -ltermcap -lm -R/usr/local/packages/SUNWspro/lib/v9:/opt/SUNWspro/lib/v9 -L/usr/l ocal/packages/SUNWspro/lib/v9 -L/usr/local/packages/SUNWspro/prod/lib/v9 -L/usr/ccs/lib/sparcv9 -L /usr/lib/sparcv9 -lfui -lfai -lfai2 -lf...

...om.o regex.o registration.o relop.o saveload.o scan.o seq.o serialize.o size.o sort.o source.o split.o sprintf.o startup.o subassign.o subscript.o subset.o summary.o sysutils.o unique.o util.o version.o vfonts.o xxxpr.o ../unix/libunix.a ../appl/libappl.a ../nmath/libnmath.a -xlic_lib=sunperf -lsunmath -Rreg -R/opt/SUNWspro/lib/sse2:/opt/SUNWspro/lib -L/opt/SUNWspro/lib/sse2 -L/opt/SUNWspro/prod/lib/sse2 -L/opt/SUNWspro/prod/lib -L/usr/ccs/lib -lfui -lfai -lfsu -lsunmath -lmtsk -lm ../extra/zlib/libz.a ../extra/bzip2/libbz2.a ../extra/pcre/libpcre.a ../extra/intl/libintl.a -lreadline -lncurses -...

Full_Name: Bob Bownes Version: 2.9.2 OS: Solaris 10 Submission from: (NULL) (164.55.254.106) The sed lines in src/unix/Makefile confuse the grep distributed with Solaris that gets configured by ./configure. Switching from a separator of ':' to a separator of ',' fixes the problem. 76,77c76,77 < @$(SED) -e "s:@rhome:$(rhome):" -e

...pendencies... yes, using cc -M checking whether cc supports -c -o FILE.lo... yes checking how to get verbose linking output from f77... -v checking for Fortran 77 libraries... -L/usr/local/lib -R/opt/SUNWspro/lib -L/opt/SUNWspro/lib -L/opt/SUNWspro/WS6/lib -L/usr/ccs/lib -L/usr/lib -lF77 -lM77 -lsunmath -lm -lcx checking for dummy main to link with Fortran 77 libraries... none checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore checking whether f77 appends underscores to external names... yes checking whether mixed C/Fortran code can be run... configure: WA...

I'm having a dynamic loading problem that seems to be caused by exponentiation (the ** operator in Fortran/ratfor). This can be illustrated by the following toy example: ===+===+===+===+===+===+===+===+===+===+===+===+===+===+===+===+===+===+=== % cat foo.r subroutine foo(x,n) x = x**n return end % f77 -c foo.r /tmp/ratfor.06661.0.f: foo: % R CMD SHLIB -o foo.so foo.o gcc -G -o

.......[omitted] version.o \ ../unix/libunix.a ../appl/libappl.a ../nmath/libmath.a -lSM -lICE -L/usr/local/X11R6.3/lib -R/usr/local/X11R6.3/lib -lX11 -lsocket -lnsl -R/opt/SUNWspro/lib -L/opt/SUNWspro/lib -L/opt/SUNWspro/SC4.2/lib -L/usr/ccs/lib -L/usr/lib /opt/SUNWspro/SC4.2/lib/libM77.a -lF77 -lsunmath -lm -lcx -lreadline -lhdf5 -lz -ldl -ltermcap -lm Undefined first referenced symbol in file compress2 /usr/local/lib/libhdf5.a(H5Z.o) ld: fatal: Symbol referencing errors. No output written to ../../bin/R.X11 ------------- Which happens because there was an...

...dtrMatrix.o dtpMatrix.o factorizations.o ldense.o lgCMatrix.o sparseQR.o abIndex.o CHOLMOD.a COLAMD.a AMD.a -L/apps/sparcv9/R-2.12.0/lib/R/lib -lRlapack -L/apps/sparcv9/R-2.12.0/lib/R/lib -lRblas -lifai -lsunimath -lfai -lfai2 -lfsumai -lfprodai -lfminlai -lfmaxlai -lfminvai -lfmaxvai -lfui -lfsu -lsunmath -lmtsk -lm ld: fatal: file CHMfactor.o: wrong ELF class: ELFCLASS64 ld: fatal: File processing errors. No output written to Matrix.so make: *** [Matrix.so] Error 2 ERROR: compilation failed for package 'Matrix' * removing '/apps/sparcv9/R-2.12.0/lib/R/library/Matrix' Some article s...

...s' file that > > configure uses to add a base set of libraries to FLIBS, but on Solaris > > at least, using the Fortran command (f77 or g77) to link a dynamic library > > does the job. For linking with ld the base FLIBS would need to be > > > > -lF77 -lM77 -lV77 -lsunmath -lm > > > > _if_ f77 is used. How viable is `use FC to link' on other platforms? > > > > I'm not sure if it does matter here, but the only way to build R on my > Alphas currently is using Fortran as LDCMD: > > in config.site: > LDCMD="f77 "...

...... -L/usr/local/lib -R/opt/SUNWspro/lib/v8plus:/opt/SUNWspro/lib -L/opt/SUNWspro/lib/v8plus -L/opt/SUNWspro/prod/lib/v8plus -L/opt/SUNWspro/lib -L/opt/SUNWspro/prod/lib -L/usr/ccs/lib -L/lib -L/usr/lib -lompstubs -lfui -lfai -lfai2 -lfsumai -lfprodai -lfminlai -lfmaxlai -lfminvai -lfmaxvai -lfsu -lsunmath -lm checking for dummy main to link with Fortran libraries... unknown configure: error: linking to Fortran libraries from C fails See `config.log' for more details.

...then 'make' in building R-1.4.0 from source, results in the following (short summary list) of compiling flags: BLAS = blas.o BLAS_LIBS = CC = cc CFLAGS = -g FC = f77 FFLAGS = -g Following suggestions given in R-admin.html, I also build R-1.4.0 with: BLAS = BLAS_LIBS = -xlic_lib=sunperf -lsunmath CC = cc -xarch=v9 CFLAGS = -xO5 -xlibmil -dalign FC = f95 -xarch=v9 FFLAGS = -xO5 -xlibmil -dalign I did few tests comparing the speed of these two builds. In short, I saw about 65% speed improvement for general use, slightly more for regression problems (2-3 times), and considerable more in matr...

...ript in 1.5.0 fails with the following errors: checking how to get verbose linking output from f77... -v checking for Fortran 77 libraries... -L/usr/local/lib -R/opt/SUNWspro/lib -L/opt/SUNWspro/lib -L/opt/SUNWspro/WS6U1/lib -L/usr/ccs/lib -L/usr/lib -lreadline -ldl -ltermcap -lm -lF77 -lM77 -lsunmath -lcx checking for dummy main to link with Fortran 77 libraries... unknown configure: error: linking to Fortran libraries from C fails Any suggestions on a possible remedy would be greatly appreciated. I'd rather not install Sun C++ if possible, and I like the optimization features of Sun C...

...ain.o libR.a -L../../lib -lRblas -R/usr/local/opt/SUNWspro/lib/v9:/opt/SUNWspro/lib/v9 -L/usr/local/opt/SUNWspro/lib/v9 -L/usr/local/opt/SUNWspro/prod/lib/v9 -L/usr/ccs/lib/sparcv9 -L/lib/sparcv9 -L/usr/lib/sparcv9 -lfui -lfai -lfai2 -lfsumai -lfprodai -lfminlai -lfmaxlai -lfminvai -lfmaxvai -lfsu -lsunmath -lmtsk -lm -lnsl -lsocket -ldl -lm -licuuc -licui18n cc: Warning: Specify a supported level of optimization when using -xopenmp, -xopenmp will not set an optimization level in a future release. Optimization level changed to 3 to support -xopenmp Undefined first referenced...

...g whether the Fortran 77 compiler (f77 ) is a cross-compiler... no checking whether we are using GNU Fortran 77... no checking for Fortran 77 libraries... -R/a/SUNWspro/lib:/opt/SUNWspro/lib -L/a/SUNWspro/lib -L/a/SUNWspro/SC4.2/lib -L/usr/ccs/lib -L/usr/lib /a/SUNWspro/SC4.2/lib/libM77.a -lF77 -lsunmath -lm -lcx checking whether f77 appends underscores... yes checking whether f77 and gcc agree on int and double... yes checking whether f77 and gcc agree on double complex... yes checking whether f77 supports -c -o FILE.lo... no checking for c++... c++ checking whether the C++ compiler (c++ ) works....

...te.o iflatread.o iflatwrite.o inpoly.o ncgetvar.o > strpos.o -L/usr/local/lib -L/opt/local/lib -lnetcdf -R/opt/SUNWspro/lib > -L/opt/SUNWspro/lib -L/opt/SUNWspro/WS6U1/lib -L/usr/ccs/lib -L/usr/lib -lfui > -lfai -lfai2 -lfsumai -lfprodai -lfminlai -lfmaxlai -lfminvai -lfmaxvai -lfsu > -lsunmath -lm > R > help > >>> Building/Updating help pages for package `Snackbar' > Formats: text html latex example > direct.read text html latex > direct.write text html latex > flat.read...

Using the 64-bit Solaris compilers make check dumps core in La_rs at 73 F77_CALL(dsyev)(jobv, uplo, &n, rx, &n, rvalues, work, &lwork, &info); I can't reproduce it easily, but example(eigen) occasionally stops with Error: abs(sm - V %*% diag(lam) %*% t(V)) < 60 * Meps is not TRUE which might be connected. The tiny rounding errors in example(eigen) aren't

...e.o util.o version.o vfonts.o xxxpr.o mkdtemp.o ../unix/libunix.a ../appl/libappl.a ../nmath/libnmath.a -L../../lib -lRblas -R/usr/local/lib/64 -R/usr/sfw/lib/64 -R/lib/amd64 -R/opt/SUNWspro/lib/amd64 -L/opt/SUNWspro/lib/amd64 -L/opt/SUNWspro/prod/lib/amd64 -L/usr/lib/amd64 -lfui -lfai -lfsu -lsunmath -lmtsk -lm ../extra/zlib/libz.a ../extra/bzip2/libbz2.a ../extra/pcre/libpcre.a ../extra/intl/libintl.a -lreadline -ltermcap -lnsl -lsocket -ldl -lm Undefined first referenced symbol in file cg_ registration.o ch...

...unique.o util.o version.o vfonts.o xxxpr.o mkdtemp.o ../unix/libunix.a ../appl/libappl.a ../nmath/libnmath.a -L../../lib -lRblas -R/usr/local/lib/64 -R/usr/sfw/lib/64 -R/lib/amd64 -R/opt/SUNWspro/lib/amd64 -L/opt/SUNWspro/lib/amd64 -L/opt/SUNWspro/prod/lib/amd64 -L/usr/lib/amd64 -lfui -lfai -lfsu -lsunmath -lmtsk -lm ../extra/zlib/libz.a ../extra/bzip2/libbz2.a ../extra/pcre/libpcre.a ../extra/intl/libintl.a -lreadline -ltermcap -lnsl -lsocket -ldl -lm Undefined first referenced symbol in file cg_ registration.o ch_...

...util.o version.o vfonts.o xxxpr.o mkdtemp.o ../unix/libunix.a ../appl/libappl.a ../nmath/libnmath.a -L../../lib -lRblas -R/usr/local/lib/64 -R/usr/sfw/lib/64 -R/lib/amd64 -R/opt/SUNWspro/lib/amd64 -L/opt/SUNWspro/lib/amd64 -L/opt/SUNWspro/prod/lib/amd64 -L/usr/lib/amd64 -lfui -lfai -lfsu -lsunmath -lmtsk -lm ../extra/zlib/libz.a ../extra/bzip2/libbz2.a ../extra/pcre/libpcre.a ../extra/intl/libintl.a -lreadline -ltermcap -lnsl -lsocket -ldl -lm Undefined first referenced symbol in file cg_ registration.o ch_ registration.o rg_ registration.o rs_ registration.o bincount registration...