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....dt,dN2.dt),c(???)) } outlv <- lsoda(c(.1,.1),t, lvcomp2, p,rtol=1e-4, atol=1e-6) outlv TIA, Henry Dr. M. Henry H. Stevens Postdoctoral Associate Department of Ecology, Evolution, & Natural Resources 14 College Farm Road Cook College, Rutgers University New Brunswick, NJ 08901-8551 email: hstevens at rci.rutgers.edu phone: 732-932-9631 fax: 732-932-8746 -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html Send "info", "help", or "[un]subscribe" (in the "...

...rt 1 2 25 9 2 2 26 16 3 2 27 6 .......... Any idea what is going on? thanks Dr. M. Henry H. Stevens Postdoctoral Associate Department of Ecology, Evolution, & Natural Resources 14 College Farm Road Cook College, Rutgers University New Brunswick, NJ 08901-8551 email: hstevens at rci.rutgers.edu phone: 732-932-9631 fax: 732-932-8746 -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html Send "info", "help", or "[un]subscribe" (in the "...

..., windows I've checked archives, and examples in text, mtext, and title. I am trying to include italicized text in the main title of a figure: ...., main = "[italics here] species name [italics stop] more plain text" TIA, Henry ***************************** Martin Henry H. Stevens HStevens at muohio.edu tel: (513) 529 - 4206 FAX: (513) 529 - 4243 338 Pearson Hall Botany Department Miami University Oxford, OH 45056 -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html Send "in...

...xported from S+ v. 6, beta2 using data.dump, but I want to make sure that it does not overwrite current objects I am using in R. How would I route the output of data.restore() to ensure the safety of my current objects? Thanks very much, Henry ***************************** Martin Henry H. Stevens HStevens at muohio.edu tel: (513) 529 - 4206 FAX: (513) 529 - 4243 338 Pearson Hall Botany Department Miami University Oxford, OH 45056 -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html Send "in...

...or intervals plotting functions. Have these and other things not yet been impoemented in R? TIA, Henry Dr. M. Henry H. Stevens Postdoctoral Associate Department of Ecology, Evolution, & Natural Resources 14 College Farm Road Cook College, Rutgers University New Brunswick, NJ 08901-8551 email: hstevens at rci.rutgers.edu phone: 732-932-9631 fax: 732-932-8746 -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html Send "info", "help", or "[un]subscribe" (in the "...

...#select random coefficients that should result in positive X*'s a <- matrix(-runif(9), nrow=3,ncol=3); diag(a) <- 1 a solve(a,rep(0,3)) # This returns the trivial answer. How do I get the meaningful one??? Thanks for any help, Henry ***************************** Martin Henry H. Stevens HStevens at muohio.edu tel: (513) 529 - 4206 FAX: (513) 529 - 4243 338 Pearson Hall Botany Department Miami University Oxford, OH 45056 -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html Send "in...

Hi All, I am running R 2.2.0 on Mac OS 10.4.2, dual G5 processors with 8 Gig RAM. I am running a simulation with lsoda that requires ~378 s to complete one set of time intervals. I need to optimize the parameters, and so need to considerably speed up the simulation. I have tried to figure out how to change the appropriate memory allocation and have search R help and Introductory

...oesn't work, and I get the ASCII? representation? maybe? When I use scan() and specify the data type (what=...), I get an error message saying that I have character data in the numeric variable. Any ideas are appreciated. Thank you, Henry ***************************** Martin Henry H. Stevens HStevens at muohio.edu tel: (513) 529 - 4206 FAX: (513) 529 - 4243 338 Pearson Hall Botany Department Miami University Oxford, OH 45056 -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html Send "in...

...ed a function to plot a scatterplot matrix with the upper triangle containing plots (and maybe fitted curves?) and the lower triangle containing the correlation coefs. I have lost that code and would love it again if anyone has it. Thanks, Henry ***************************** Martin Henry H. Stevens HStevens at muohio.edu tel: (513) 529 - 4206 FAX: (513) 529 - 4243 338 Pearson Hall Botany Department Miami University Oxford, OH 45056 -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html Send "in...

Using R v. 1.7.0 on Windows 2000 I would like to plot the fitted values of a model as a function of a continuous covariate, augmented with data (e.g., augPred) grouping by combinations of fixed effects. I have not been able to use augPred effectively, and am wondering if it does not handle unbalanced data (3 out of 192 missing). I include below the model and an xyplot that almost does the

Windows 2000 . 5.00.2195 with Service Pack 1. R 1.5.1 Output from my split-split plot aov "alerted" me that I have done something wrong. I designed an experiment with all combinations of all levels of each treatment, but lost a little data (3 out of 192 plots). With the following data, I run the following model: > collim[c(1:6,187:192),c(1,3:6,9)] plot Litter Fert

All, In the function below I have 24 individuals and 6 calculations per individual. The 6 calculations are collected each time in a 1:24 loop when calculating "delta". I'd like to collect all 144 = 24*6 calculations in one vector ("delta.patient.comb"). The function works as is via indexing, but is there an easier way to collect the measurements via appendinng the 6

Windows 2000 (v.5.00.2195), R 1.5.1 I have an lme object, fm0, which I examine with anova() and intervals(). The anova output indicates one of the interaction terms is significant, but the intervals output shows that the single parameter for that term includes 0.0 in its 95% CI. I believe that the anova is a conditional (sequential) test; is intervals marginal or approximate? Which should I

As a user of only R, I don't use much of the potential of ESS and Emacs. Without entering a religious feud, is there any reason I should use XEmacs rather than my current GNU Emacs? (I looked on the XEmacs site, but I didn't understand the programming issues they were talking about (over my head).) Martin Henry H. Stevens, Assistant Professor 338 Pearson Hall Botany Department Miami

Hi - I am getting different results when I run the numerical integrator function lsoda (odesolve package) on a Mac and a PC. I am trying to simulating a system of 10 ODE's with two exogenous pulsed inputs to the system, and have had reasonably good success with many model parameter sets. Under some parameter sets, however, the simulations fail on the Mac (see error message below). The

...iv(), and attr(), I had absolutely no idea how to get just F'(x) evaluated a x. Many thanks, Henry Dr. M. Henry H. Stevens Postdoctoral Associate Department of Ecology, Evolution, & Natural Resources 14 College Farm Road Cook College, Rutgers University New Brunswick, NJ 08901-8551 email: hstevens at rci.rutgers.edu phone: 732-932-9631 fax: 732-932-8746 -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html Send "info", "help", or "[un]subscribe" (in the "...

...hat example data sets could be accessed by simply typing in the name of the data set associated with any loaded library (e.g. 'cars', or if MASS is loaded, 'hills'). Why might this data not show up? Thanks for ideas in advance. ***************************** Martin Henry H. Stevens HStevens at muohio.edu tel: (513) 529 - 4206 FAX: (513) 529 - 4243 338 Pearson Hall Botany Department Miami University Oxford, OH 45056 -------------- next part -------------- An HTML attachment was scrubbed... URL: https://stat.ethz.ch/pipermail/r-help/attachments/20010716/a06b1cc0/attachment.html

Hi Folks, I am using Windows 2000 and was wondering what (Open Source) software R users use or might recommend for symbolic computations (aside from the ol' noggin, e.g., Maxima, Mathomatic) . Thanks, Hank Dr. Martin Henry H. Stevens, Assistant Professor 338 Pearson Hall Botany Department Miami University Oxford, OH 45056 Office: (513) 529-4206 Lab: (513) 529-4262 FAX: (513) 529-4243

Hello, I'm looking for a R function proceeding MRPP (Multi-Response Permutation Procedures). Is it available? Thanking you in anticipation, Jeanne Vallet, PhD student [[alternative HTML version deleted]]

Hi folks, I have assumed that ratios of variance components (Fst and Qst in population genetics) could be estimated using the output of mcmcsamp (the series on mcmc sample estimates of variance components). What I have started to do is to use the matrix output that included the log(variances), exponentiate, calculate the relevant ratio, and apply either quantile or or HPDinterval to get