search for: fahim

...ad properly. Instead, the value showing is "Inf" . How should i read this file? as.is/colclasses field in read function is not helping me. Is there any package that can do bitwise operation(and/or) on bitVectors. bitops seems to do that but I need output in bitvector format only. Thanks Fahim -- Fahim Mohammad Bioinforformatics Lab University of Louisville Louisville, KY, USA Ph: +1-502-409-1167 [[alternative HTML version deleted]]

now i am using cucumber.........and i get two topic webrat and capybara........wat is the diff between them???????which one is good?????which one i use????? Regards Fahim Babar Patel -- You received this message because you are subscribed to the Google Groups "Ruby on Rails: Talk" group. To post to this group, send email to rubyonrails-talk-/JYPxA39Uh5TLH3MbocFF+G/Ez6ZCGd0@public.gmane.org To unsubscribe from this group, send email to rubyonrails-talk+un...

Hi all, Can any one tell me how to use Ajax with Rails. Send me quick start up link and videos. Thanks Regards Fahim Babar PAtel -- You received this message because you are subscribed to the Google Groups "Ruby on Rails: Talk" group. To post to this group, send email to rubyonrails-talk-/JYPxA39Uh5TLH3MbocFF+G/Ez6ZCGd0@public.gmane.org To unsubscribe from this group, send email to rubyonrails-...

...rc_AI178259_f_at', 'rc_AI179134_i_at', 'rc_AI179134_f_at', 'rc_AI104113_at', 'rc_AA819429_f_at' Is there any function to do this. I can do it by using iterative paste but I just want to avoid it for efficiency reason as number of probes is very high. Thanks --Fahim [[alternative HTML version deleted]]

...thing similar to SeqIO.parse(input_handle, "genbank") in bioPython that convert the genebank sequence into fasta sequence. (One option is to call biopython from R but I am not familiar with python functions so I want to avoid that and I am keeping it as last resort) Thanks and regards. --Fahim -- Fahim Mohammad Bioinforformatics Lab University of Louisville Louisville, KY, USA Ph: +1-502-409-1167 [[alternative HTML version deleted]]

Hi How to access the values in the output that is an object of S4 type. I tried to access using subset ( [ ] ) but it is not allowed. Any clue?? Thanks -- Fahim #My code is as follows: require(IRanges); query <- IRanges(c(1, 4, 9), c(5, 7, 10)) subject <- IRanges(c(2, 2, 10), c(2, 3, 12)) findOverlaps(query, subject) Output of find overlap function is: ------------------ 1> findOverlaps(query, tree) An object of class "RangesMatching&quo...

...sing: >arr[1, ] Error in arr[1, 1] : incorrect number of dimensions Though it is showing the value as under: > arr[1] [1] "y1" > arr[2] [1] "y2" I think, when there is single row, R is considering it as an array and not as matrix. But why it is so?????????????/ -Fahim -- View this message in context: http://n4.nabble.com/strange-behavior-of-R-tp1010047p1010047.html Sent from the R help mailing list archive at Nabble.com.

...000000000000100000000100000001100......................" "ccccc" "000000000000000000000000000000000000000000000000000000000000000000000000000..." "dddddd" "0000000000000000000000000000000000000000000000000000000000000000000000000000.." Thanks -- Fahim Mohammad Bioinforformatics Lab University of Louisville Louisville, KY, USA Ph: +1-502-409-1167 [[alternative HTML version deleted]]

Hi all, I follow All the steps for recaptcha , but i am confused how to test on my local host. Because when we register in google recaptcha it ask for domain URL, i stuck here. Q What should i enter in domain url ? Hope that you all understand the problem. Thanks Regards Fahim Babar Patel -- You received this message because you are subscribed to the Google Groups "Ruby on Rails: Talk" group. To post to this group, send email to rubyonrails-talk-/JYPxA39Uh5TLH3MbocFF+G/Ez6ZCGd0@public.gmane.org To unsubscribe from this group, send email to rubyonrails-talk+u...

...{ puts( "Output file not given.\n" ); } } else {printf("wrong usage: Try Agay!!! correct usage is:= functionName inputfileToParse outFileToWriteInto\n"); } while(fgets(line, 81, fr) != NULL) -- --- -- } Thanks again Fahim -- Fahim Mohammad Bioinforformatics Lab University of Louisville Louisville, KY, USA Ph: +1-502-409-1167 [[alternative HTML version deleted]]

...col2 col3 col4 G234064 1 1 0 0 // 1 appears in col1 and col2 above, rest are zero G234065 0 1 1 1 // 1 appears in col2 , 3 and 4 above. Thanks -- Fahim [[alternative HTML version deleted]]

...again work in R, I have to repeat the process of package install. This reintallation problem was not there in windows(I was using Tinn-R as editor, I just need to put require('package-name') to use its function). Is there anyway so that reinstallation of the package is avoided??? thanks --Fahim [[alternative HTML version deleted]]

...ing: Failed to invoke method setNodesPositions in class tudelft.CytoscapeRPC.CytoscapeRPCCallHandler: null setPosition(cw, nodesTo , c(600, 600, 600), c(100, 200, 300)) Error in convertToR(xmlParse(node, asText = TRUE)) : faultCode: 1001 faultString: Node with id: D could not be found. Thanks --Fahim [[alternative HTML version deleted]]

can we write multiple background in one feature file....? can we write multiple feature in one feature file.....? -- You received this message because you are subscribed to the Google Groups "Ruby on Rails: Talk" group. To post to this group, send email to rubyonrails-talk-/JYPxA39Uh5TLH3MbocFF+G/Ez6ZCGd0@public.gmane.org To unsubscribe from this group, send email to

...here is no such cows_milkmans table is present.. And we all know that has_and_belongs_to_many not generate any migrate file. What should i do now? how to generate third table in test database ? If there is no solution than i know that i have to create cows_milkmans table manually . Thanks Fahim Babar Patel -- You received this message because you are subscribed to the Google Groups "Ruby on Rails: Talk" group. To post to this group, send email to rubyonrails-talk-/JYPxA39Uh5TLH3MbocFF+G/Ez6ZCGd0@public.gmane.org To unsubscribe from this group, send email to rubyonrails-tal...

Hi all, I read Formtastic and SimpleForm gem. I am using 3.4 Q 1 Is any one of this is by default included in Rails ? Q2 Any advantage of this gems over simple form tags ? As per my knowledge we are using form helper , but still i raised the qustion ? Thanks Regards Fahim Babar Patel -- You received this message because you are subscribed to the Google Groups "Ruby on Rails: Talk" group. To post to this group, send email to rubyonrails-talk-/JYPxA39Uh5TLH3MbocFF+G/Ez6ZCGd0@public.gmane.org To unsubscribe from this group, send email to rubyonrails-t...

...re are two node-edge pair. There can be more also, so it is variable. In other sense it can be said that, the matrix is a 3-d matrix with a variable third dimension. I tried the problem with list but I was partially succesful. Any suggestion in this regard will be highly appreciated. thanks ---Fahim Louisville, KY, USA [[alternative HTML version deleted]]

I wish to use nileshtrivedi-gupshup gem but i am getting this error. Can any one know about this? ERROR Could not find gem ''nileshtrivedi-gupshup (>= 0) ruby'' in the gems available on this machine. Thanks Fahim Babar Patel -- You received this message because you are subscribed to the Google Groups "Ruby on Rails: Talk" group. To post to this group, send email to rubyonrails-talk-/JYPxA39Uh5TLH3MbocFF+G/Ez6ZCGd0@public.gmane.org To unsubscribe from this group, send email to rubyonrails-talk+un...

I am having trouble with paste function. I dont know how to proceed. I tried many options but i failed miserably. I am using a variable f1 to assign a string as below: f1=dataLine[locAffyProbeID]; ( the value of f1 is 244901_at ) Then I am using the paste function paste("set @g1=", f1); instead of getting set at g1=244901_at, I am getting set @g1=23. I am not able to understand

...knowledge. But now my question is raised . Q is we have to start rails server port 3000 on another terminal ? or localtunnel server is enough for our development server which we have already started on 3000 port ?. Q Can any one tell me advantage of localtunnel gem ? Thanks Regards Fahim Babar Parel -- You received this message because you are subscribed to the Google Groups "Ruby on Rails: Talk" group. To post to this group, send email to rubyonrails-talk-/JYPxA39Uh5TLH3MbocFF+G/Ez6ZCGd0@public.gmane.org To unsubscribe from this group, send email to rubyonrails-talk+un...