search for: ddr1

...t combines data based on matching geneID and exons. i have used the merge option, but it does not give me the desired outcome. merged.txt shows the result i would like. *File1. txt* ** AffyProbe ProbeType Flag GeneSymbol GeneID Exons Chrom Strand Affytart AffyEnd 1 1007_s_at:1105:483 0 0 DDR1 780 21 6 + 30975403 30975427 2 1007_s_at:1119:177 0 0 DDR1 780 21 6 + 30975549 30975573 3 1007_s_at:1136:469 0 0 DDR1 780 21 6 + 30975766 30975790 4 1007_s_at:192:205 0 0 DDR1 780 21 6 + 30975523 30975547 5 1007_s_at:474:1161 0 0 DDR1 780 21 6 + 30975745 30975769 6 1007_s_at:504:983 0 0 DDR1 780 21...

...t combines data based on matching geneID and exons. i have used the merge option, but it does not give me the desired outcome. merged.txt shows the result i would like. *File1. txt* ** AffyProbe ProbeType Flag GeneSymbol GeneID Exons Chrom Strand Affytart AffyEnd 1 1007_s_at:1105:483 0 0 DDR1 780 21 6 + 30975403 30975427 2 1007_s_at:1119:177 0 0 DDR1 780 21 6 + 30975549 30975573 3 1007_s_at:1136:469 0 0 DDR1 780 21 6 + 30975766 30975790 4 1007_s_at:192:205 0 0 DDR1 780 21 6 + 30975523 30975547 5 1007_s_at:474:1161 0 0 DDR1 780 21 6 + 30975745 30975769 6 1007_s_at:504:983 0 0 DDR1 780 21...

Hi, I have the following data frame: > print(mydatframe) __DATAFRAME__ V1 V2 V3 1 1007_s_at DDR1 discoidin domain receptor tyrosine kinase 1 2 1053_at RFC2 replication factor C (activator 1) 2, 40kDa 3 117_at HSPA6 heat shock 70kDa protein 6 (HSP70B') __END__ Is there a way to create a hash with V2 as Key and V3 as its value? - Gundala Viswanath Jakarta - Indonesia

Hi all, Suppose I have a vector like this: [1] "STAT1" "STAT1" "STAT1" "STAT1" "GAPDH" "GAPDH" "GAPDH" "ACTB" "ACTB" [10] "ACTB" "DDR1" "RFC2" "HSPA6" "PAX8" "GUCA1A" "UBE1L" "THRA" "PTPN21" [19] "CCL5" "CYP2E1" "STAT1" "THRA" "PAX8" I would like to produce a vector such that it has the same...

Hi, I have the following data file to be parsed and captured as a data frame: __DATA__ #GDS_ID GENE_NAME GENE_DESCRIPTION GENE_FUNCTION 1007_s_at | DDR1 | discoidin domain receptor tyrosine kinase 1 | protein-coding 1053_at | RFC2 | replication factor C (activator 1) 2, 40kDa | protein-coding 117_at | HSPA6 | heat shock 70kDa protein 6 (HSP70B') | protein-coding __END__ In particular it is separated by " | " , namely - space, bar, s...

Hi, I have the following function: > kurtosis <-function(x) (mean((x-mean(x))^4))/(sd(x)^4) #x is a vector and data > print(mydata) V1 V2 V3 V4 V5 1 1007_s_at DDR1 2865.1 2901.3 1978.3 2 1053_at RFC2 103.6 81.6 108.0 3 117_at HSPA6 222.0 222.5 306.2 4 121_at PAX8 2146.3 2457.2 1901.9 5 1255_g_at GUCA1A 226.5...

...p power (yes, still haven't figured out how to use upssched...) The system used for testing was an old PIII/500MHz/512KB cache, 256MB RAM (3 x SDRAM 100MHz) 1 x 8GB hdd IDE and a 250W PS. For various reasons I've switched to a new system consisting of one Duron 900MHz, 1 piece of 512MB RAM DDR1 and a 12GB IDE (same family as the previous 8GB). After reinstall, an upgrade to "nut-2.2.0-6.1.fc8", copying of the same nut config files and editing them so that the driver is now megatec instead of powermust I've discovered that the battery time is down to a mere 4 minutes. Any ide...

...ever, I have no problem with the code to read in a similar txt file which consists of 22277 rows, 72 columns. > exprSet <- read.table('70mel_GSA.txt', row.names = 1,header =FALSE) > dim(exprSet) [1] 22277 71 > exprSet[1:4,1:4] V2 V3 V4 V5 GENE1 DDR1 10.215229 8.546666 9.207030 GENE2 RFC2 8.028489 8.175520 9.090902 GENE3 HSPA6 4.633769 4.822625 5.125172 GENE4 PAX8 6.121433 6.396281 6.000987 The two txt files are of similar format. The only difference so far I can tell is that the second file is of more rows and columns. Other than that, t...

...s the login window.) 3 (http://img167.imageshack.us/img167/8696/srounderwinefr4.png) I guess that it have something to do with the ati drivers, but I don't really know it. Does anybody know a Solution for this, apart from buying a nvidia graphics card ? My system: Amd Athlon 64 X2 3800+ 1gb ddr1 Radeon 9800pro Ati driver: 8.3 Ubuntu Gutsy Gibbon

...0.0] using image from PRAMIN [ 0.902277] nouveau [ VBIOS][0000:01:00.0] BMP version 5.29 [ 0.902626] nouveau [ VBIOS][0000:01:00.0] version 04.34.20.79.00 [ 0.903039] nouveau W[ PTIMER][0000:01:00.0] unknown input clock freq [ 0.903296] nouveau [ PFB][0000:01:00.0] RAM type: DDR1 [ 0.903545] nouveau [ PFB][0000:01:00.0] RAM size: 64 MiB [ 0.903794] nouveau [ PFB][0000:01:00.0] ZCOMP: 0 tags [ 0.906062] nouveau [ CLK][0000:01:00.0] --: [ 0.906362] [TTM] Zone kernel: Available graphics memory: 5055574 kiB [ 0.906612] [TTM] Zone dma32: Av...

...S][0000:04:00.0] running init tables [ 307.209253] nouveau 0000:04:00.0: irq 47 for MSI/MSI-X [ 307.209266] nouveau [ PMC][0000:04:00.0] MSI interrupts enabled [ 307.209281] nouveau W[ PTIMER][0000:04:00.0] unknown input clock freq [ 307.209288] nouveau [ PFB][0000:04:00.0] RAM type: DDR1 [ 307.209290] nouveau [ PFB][0000:04:00.0] RAM size: 64 MiB [ 307.209292] nouveau [ PFB][0000:04:00.0] ZCOMP: 0 tags [ 307.215653] nouveau [ DRM] VRAM: 63 MiB [ 307.215656] nouveau [ DRM] GART: 128 MiB [ 307.215659] nouveau [ DRM] BMP version 5.41 [ 307.215662] nou...

...>> [ 307.209253] nouveau 0000:04:00.0: irq 47 for MSI/MSI-X >> [ 307.209266] nouveau [ PMC][0000:04:00.0] MSI interrupts enabled >> [ 307.209281] nouveau W[ PTIMER][0000:04:00.0] unknown input clock freq >> [ 307.209288] nouveau [ PFB][0000:04:00.0] RAM type: DDR1 >> [ 307.209290] nouveau [ PFB][0000:04:00.0] RAM size: 64 MiB >> [ 307.209292] nouveau [ PFB][0000:04:00.0] ZCOMP: 0 tags >> [ 307.215653] nouveau [ DRM] VRAM: 63 MiB >> [ 307.215656] nouveau [ DRM] GART: 128 MiB >> [ 307.215659] nouveau [...

...: Invalid ROM contents nouveau [ VBIOS][0000:0a:00.0] ... signature not found nouveau [ VBIOS][0000:0a:00.0] using image from OpenFirmware nouveau [ VBIOS][0000:0a:00.0] BIT signature found nouveau [ VBIOS][0000:0a:00.0] version 05.43.02.75.00 nouveau [ PFB][0000:0a:00.0] RAM type: DDR1 nouveau [ PFB][0000:0a:00.0] RAM size: 128 MiB nouveau [ PFB][0000:0a:00.0] ZCOMP: 378880 tags nouveau 0000:0a:00.0: Using 32-bit DMA via iommu [TTM] Zone kernel: Available graphics memory: 1487676 kiB [TTM] Initializing pool allocator nouveau [ DRM] VRAM: 124 MiB nouveau [...

...p 4194303k(4194303k free) vm_info: Java HotSpot(TM) Client VM (1.6.0_01-b06) for windows-x86, built on Mar 14 2007 00:24:02 by "java_re" with unknown MS VC++:1310 Please somebody help! Thanks in advance! JVM 1.6.0_01 Wine 1.2 1.1.31-0Ubuntu3 Linux Ubuntu 9.10 Karmic Koala 2GB ran ddr1 4GB Swap space Ext4 Disk partition

...nouveau 0000:04:00.0: irq 47 for MSI/MSI-X >>>> [ 307.209266] nouveau [ PMC][0000:04:00.0] MSI interrupts enabled >>>> [ 307.209281] nouveau W[ PTIMER][0000:04:00.0] unknown input clock freq >>>> [ 307.209288] nouveau [ PFB][0000:04:00.0] RAM type: DDR1 >>>> [ 307.209290] nouveau [ PFB][0000:04:00.0] RAM size: 64 MiB >>>> [ 307.209292] nouveau [ PFB][0000:04:00.0] ZCOMP: 0 tags >>>> [ 307.215653] nouveau [ DRM] VRAM: 63 MiB >>>> [ 307.215656] nouveau [ DRM] GART: 128 MiB &g...

...rq 47 for MSI/MSI-X >>>>>> [ 307.209266] nouveau [ PMC][0000:04:00.0] MSI interrupts enabled >>>>>> [ 307.209281] nouveau W[ PTIMER][0000:04:00.0] unknown input clock freq >>>>>> [ 307.209288] nouveau [ PFB][0000:04:00.0] RAM type: DDR1 >>>>>> [ 307.209290] nouveau [ PFB][0000:04:00.0] RAM size: 64 MiB >>>>>> [ 307.209292] nouveau [ PFB][0000:04:00.0] ZCOMP: 0 tags >>>>>> [ 307.215653] nouveau [ DRM] VRAM: 63 MiB >>>>>> [ 307.215656] nouv...

...ning init tables > [ 307.209253] nouveau 0000:04:00.0: irq 47 for MSI/MSI-X > [ 307.209266] nouveau [ PMC][0000:04:00.0] MSI interrupts enabled > [ 307.209281] nouveau W[ PTIMER][0000:04:00.0] unknown input clock freq > [ 307.209288] nouveau [ PFB][0000:04:00.0] RAM type: DDR1 > [ 307.209290] nouveau [ PFB][0000:04:00.0] RAM size: 64 MiB > [ 307.209292] nouveau [ PFB][0000:04:00.0] ZCOMP: 0 tags > [ 307.215653] nouveau [ DRM] VRAM: 63 MiB > [ 307.215656] nouveau [ DRM] GART: 128 MiB > [ 307.215659] nouveau [ DRM] BMP versio...

...t;>>>>>> [ 307.209266] nouveau [ PMC][0000:04:00.0] MSI interrupts enabled > >>>>>>> [ 307.209281] nouveau W[ PTIMER][0000:04:00.0] unknown input clock freq > >>>>>>> [ 307.209288] nouveau [ PFB][0000:04:00.0] RAM type: DDR1 > >>>>>>> [ 307.209290] nouveau [ PFB][0000:04:00.0] RAM size: 64 MiB > >>>>>>> [ 307.209292] nouveau [ PFB][0000:04:00.0] ZCOMP: 0 tags > >>>>>>> [ 307.215653] nouveau [ DRM] VRAM: 63 MiB > >>>...

...307.209253] nouveau 0000:04:00.0: irq 47 for MSI/MSI-X >>> [ 307.209266] nouveau [ PMC][0000:04:00.0] MSI interrupts enabled >>> [ 307.209281] nouveau W[ PTIMER][0000:04:00.0] unknown input clock freq >>> [ 307.209288] nouveau [ PFB][0000:04:00.0] RAM type: DDR1 >>> [ 307.209290] nouveau [ PFB][0000:04:00.0] RAM size: 64 MiB >>> [ 307.209292] nouveau [ PFB][0000:04:00.0] ZCOMP: 0 tags >>> [ 307.215653] nouveau [ DRM] VRAM: 63 MiB >>> [ 307.215656] nouveau [ DRM] GART: 128 MiB >>> [ 30...

https://bugs.freedesktop.org/show_bug.cgi?id=61069 Priority: medium Bug ID: 61069 Assignee: nouveau at lists.freedesktop.org Summary: Crash while displaying large image QA Contact: xorg-team at lists.x.org Severity: normal Classification: Unclassified OS: All Reporter: dave.mueller at gmx.ch