search for: atl_xerbla

If I configure in R-patched and R-devel, with the same options to configure, then R-patched says checking for ATL_xerbla in -latlas... yes checking for cblas_dgemm in -lcblas... yes checking for dgemm_ in -lf77blas... yes which R-devel says checking for ATL_xerbla in -latlas... yes checking for cblas_dgemm in -lcblas... yes checking for dgemm in -lf77blas... no This is on the same computer and using the same libra...

Hi, I want to install "Matrix" using > install.packages("Matrix") After a while I get: checking whether we are using GNU C... yes checking whether gcc accepts -g... yes checking for ATL_xerbla in -latlas... no checking for dgemm_ in -lcxml... no checking for dgemm_ in -ldxml... no checking for dgemm_ in -lscs... no checking for dgemm_ in -lcomplib.sgimath... no checking for zherk in -lblas... no checking for dgemm_ in -lblas... no could not find your BLAS library ERROR: Configuration fai...

.../util/Intel/mkl/10.0.1.014/lib/em64t/libmkl_gnu_thread.a /usr1/util/Intel/mkl/10.0.1.014/lib/em64t/libmkl_core.a -Wl,--end-group -liomp5 -lguide -lpthread -lgomp... no checking for dgemm_... no checking for ATL_xerbla in -latlas... yes checking for dgemm_ in -lf77blas... no checking for dgemm_ in -lblas... yes checking for dgemm_ in -ldgemm... no checking for dgemm_ in -lblas... (cached) yes checking for dgemm_ in -lessl... no checking for dgemm_ in -lblas... (cached) yes I've looked in the MKL .a files and...

...' CXXFLAGS='-O3 -pipe -march=native' R_PAPERSIZE='letter' The configuration routine returns the following errors: checking for cblas_cdotu_sub in vecLib framework... no checking for dgemm_ in -L/usr/local/atlas/lib -latlas -lf77blas... no checking for dgemm_... no checking for ATL_xerbla in -latlas... no checking for dgemm_ in -lblas... no checking for dgemm_ in -lblas... (cached) no checking for dgemm_ in -lblas... (cached) no Looking at the config.log shows the following: configure:28566: checking for dgemm_ in -L/usr/local/atlas/lib -latlas -lf77blas configure:28587: gcc -std=...

...source package `Matrix' ... creating cache ./config.cache checking for gcc... gcc checking whether the C compiler (gcc ) works... yes checking whether the C compiler (gcc ) is a cross-compiler... no checking whether we are using GNU C... yes checking whether gcc accepts -g... yes checking for ATL_xerbla in -latlas... no checking for dgemm_ in -lcxml... no checking for dgemm_ in -ldxml... no checking for dgemm_ in -lscs... no checking for dgemm_ in -lcomplib.sgimath... no checking for zherk in -lblas... no checking for dgemm_ in -lblas... yes checking for cheev_ in -llapack... yes updating cache ./...

...or R on my Sun Machine. The OS is Solaris 7 > Sparc Version. > > I conduct the following error message: > > bash-2.05# R INSTALL Matrix_0.3-21.tar.gz > * Installing *source* package 'Matrix' ... > checking for gcc... gcc ... > ng for sgemm_... no > checking for ATL_xerbla in -latlas... no > checking for sgemm_ in -lblas... no > checking for sgemm_ in -lcxml... no > checking for sgemm_ in -ldxml... no > checking for sgemm_ in -lscs... no > checking for sgemm_ in -lcomplib.sgimath... no > checking for sgemm_ in -lblas... (cached) no > checking for...

...ingle libatlas.a and install it in /some/dir. 3. relink Octave by running make SPECIAL_MATH_LIB=/some/dir/libatlas.a That seems to be all that is needed. Would it be possible to modify the ATLAS makefiles to just build a libatlas.a? Then Octave could simply have AC_CHECK_LIB(atlas, ATL_xerbla) in the configure script, and set SPECIAL_MATH_LIB accordingly. Things might get a little more complicated for shared libraries. Some systems seem to barf when multiple shared libraries define the same symbol. But it would probably be possible to solve that, either by doing whatever is necesary...

...ing whether c++ accepts -M for generating dependencies... yes checking whether c++ supports -c -o FILE.lo... yes checking for sin in -lm... yes checking for sin in -lmoto... no checking for main in -lncurses... no checking for main in -ltermcap... yes checking for dlopen in -ldl... yes checking for ATL_xerbla in -latlas... no checking for zherk in -lblas... no checking for dgemm_ in -lblas... no checking for rl_callback_read_char in -lreadline... yes checking for working alloca.h... yes checking for alloca... yes checking for ANSI C header files... yes checking for pid_t... yes checking for vfork.h... n...

...type... x86_64-unknown-linux-gnu > checking host system type... x86_64-unknown-linux-gnu > > checking whether C99 double complex is compatible with Rcomplex... yes > yes > checking for cblas_cdotu_sub in vecLib framework... no > checking for dgemm_... no > checking for ATL_xerbla in -latlas... no > checking for dgemm_ in -lblas... yes > checking for dgemm_ in -ldgemm... no > checking for dgemm_ in -lblas... (cached) yes > checking for dgemm_ in -lessl... no > checking for dgemm_ in -lblas... (cached) yes > checking whether double complex BLAS can be...

...checking for csinh... yes checking for ctanh... yes checking for cacosh... yes checking for casinh... yes checking for catanh... yes checking whether C99 double complex is compatible with Rcomplex... no no checking for cblas_cdotu_sub in vecLib framework... no checking for dgemm_... no checking for ATL_xerbla in -latlas... no checking for dgemm_ in -lblas... no checking for dgemm_ in -lsunperf... no checking for dgemm_ in -lblas... (cached) no checking for dgemm_ in -lblas... (cached) no checking wchar.h usability... yes checking wchar.h presence... yes checking for wchar.h... yes checking wctype.h usab...

...king whether g++ accepts -M for generating dependencies... yes checking whether g++ supports -c -o FILE.lo... yes checking for sin in -lm... yes checking for sin in -lmoto... no checking for main in -lncurses... no checking for main in -ltermcap... yes checking for dlopen in -ldl... no checking for ATL_xerbla in -latlas... no checking for zherk in -lblas... no checking for dgemm_ in -lblas... yes checking for rl_callback_read_char in -lreadline... no checking for working alloca.h... yes checking for alloca... yes checking for ANSI C header files... yes checking for pid_t... yes checking for vfork.h... n...

...no checking for main in -lncurses... no checking for main in -ltermcap... yes checking for dlopen in -ldl... yes checking for main in -lz... no checking for gethostbyname... no checking for gethostbyname in -lnsl... yes checking for connect... no checking for connect in -lsocket... yes checking for ATL_xerbla in -latlas... no checking for dgemm_ in -lcxml... no checking for dgemm_ in -ldxml... no checking for dgemm_ in -lscs... no checking for dgemm_ in -lcomplib.sgimath... no checking for zherk in -lblas... no checking for dgemm_ in -lblas... no checking for rl_callback_read_char in -lreadline... no ch...

...__setfpucw... no checking for working calloc... no checking for working finite... yes checking for working log... yes checking for working log1p... yes checking for working strptime... yes checking whether ftell works correctly on files opened for append... yes checking for sgemm... no checking for ATL_xerbla in -latlas... no checking for sgemm in -lblas... yes checking for dgemm in -ldgemm... no checking for sgemm in -lblas... (cached) yes checking for sgemm in -lessl... yes checking wchar.h usability... yes checking wchar.h presence... yes checking for wchar.h... yes checking wctype.h usability... yes...

...## configure: WARNING: ## Report this to r-bugs at R-project.org ## configure: WARNING: ## ----------------------------------- ## checking for complex.h... yes checking for double complex... no no checking for cblas_cdotu_sub in vecLib framework... no checking for dgemm_... no checking for ATL_xerbla in -latlas... no checking for dgemm_ in -lblas... yes checking for dgemm_ in -ldgemm... no checking for dgemm_ in -lsunperf... no checking for dgemm_ in -lblas... (cached) yes checking for dgemm_ in -lessl... no checking for dgemm_ in -lblas... (cached) yes checking whether double complex BLAS can...

...ermcap... (cached) yes checking for dlopen in -ldl... (cached) yes checking for main in -lz... (cached) yes checking for gethostbyname... (cached) no checking for gethostbyname in -lnsl... (cached) yes checking for connect... (cached) no checking for connect in -lsocket... (cached) yes checking for ATL_xerbla in -latlas... (cached) no checking for dgemm_ in -lscs... (cached) no checking for dgemm_ in -lcomplib.sgimath... (cached) no checking for zherk in -lblas... (cached) no checking for dgemm_ in -lblas... (cached) no checking for rl_callback_read_char in -lreadline... (cached) no checking for working...

...ing gethostbyname... none required checking for library containing xdr_string... none required checking for __setfpucw... no checking for working calloc... no checking for working finite... no checking for working log... no checking for working strptime... yes checking for sgemm_... no checking for ATL_xerbla in -latlas... no checking for sgemm_ in -lblas... no checking for acosp in -lsunmath... no checking for sgemm_ in -lblas... (cached) no checking for sgemm_ in -lblas... (cached) no checking for X... libraries , headers checking for gethostbyname... yes checking for connect... yes checking for remo...