search for: agiles

Hi, I am following the protocol outlined here for analysis of single channel Agilent microarray data: http://matticklab.com/index.php?title=Single_channel_analysis_of_Agilent_microarray_data_with_Limma I keep getting the following error message when using Limma's read.maimages function to load my data into an RGList object: Error in RG[[a]][, i] <- obj[, columns[[a]]] : number of

Hi, I would like to analyze some agilent aCGH copy number files. As a start, I would like to normalize this data. I don't know what is the standard way to do this. Which package is the standard one that people use for this purpose? The chips that I am looking at are the agilent sure print 1M (G4447a) array and a custom chip with similar format. My raw data is a text file with spot locations

I''m a real Newb; just bought AWDwR and using it with Win2000 - it took me ages, and only after reading Curt Hibbs Rolling with Ruby, to realise that I needed to use Cmd.exe before using AWDwR''s dave> instructions. I''ve created Say/hello.html and I still get "Template is missing" with http://localhost:3000/say/hello I''ve read

Apologies for cross-posting. We''ve been asked to do a job for a client who wants to embrace agile development methodologies. Hurrah! However, our standard contract was written for the 1980s. It is full of phrases like "agreed specification" and "change request procedure" and so on. I was wondering, how do other people get around this in contract forms with

Hi all, We have a HP-UX 11i server running as a samba server. Users use Windows 2000 boxes with Service Pack 4 to connect to the samba server. Several days ago, we upgraded samba server from 2.0.7 to 3.0.5, and we started to experience the following problem: The general connection and access to the samba server is ok. However, under the samba share there have been some directories mounted from

Hi, I''m running the code example for ''Dynamically Updating a List'' in Agile pages 404-406: When I enter a new to-do, and click ''New Item'', a new page is rendered only displaying the new to-do just entered. This isn''t what''s expected. The to-do list with id="items" should be updated so the to-do list dynamically grows.

Wine Enthusiasts, I'm new to Wine and am having a problem installing some software. I didn't see the application in question in the Application Database. I'm hoping the problem is something simple and that perhaps a Wine guru on the list can point me in the right direction. I don't have Windoze installed on any of my boxes. Unfortunately I now find myself needing to run a

Hi *, In an attempt to go back to the drawing board and learn RoR some more - I have built the depot application from the agile book. After finishing I tried to create a user for the admin section, however when ever I go to: http://localhost:3000/login/add_user It redirects to the login action, I don''t see the [add user] submit button?? I am sure this is connected to the

Hi all I''m just wondering if I get the 2nd version of "Agile Web Development with Ruby on Rails" for free if I already own the 1st edition paperback/PDF combo? And anyway: I wanted to update my first edition, but I can''t find the link anymore where I could get a new PDF version? Thanks a lot for help. Josh -- Posted via http://www.ruby-forum.com/.

I''m following Agile Edition 1. On page 148 it suggests using instance variables named after the fixture, for example: assert_equal @version_control_book.id, @product.id When I introduce this type of instance variable into my test, I get the following error: 1) Error: test_not_owner(GroupTest): RuntimeError: Called id for nil, which would mistakenly be 4 -- if you really wanted the

Hi, Anbody having "Agile Web Development with Rails" soft copy please send me sansflair-Re5JQEeQqe8AvxtiuMwx3w@public.gmane.org Thanks and Regards, San -- Posted via http://www.ruby-forum.com/. --~--~---------~--~----~------------~-------~--~----~ You received this message because you are subscribed to the Google Groups "Ruby on Rails: Talk" group. To post to this group,

Hi, I''m reading the "Agile Web Development With Rails" book. So long, everything has worked fine, but now I got this annoying error message that I just can''t understand. The error appears for me around page 87, chapter 8. NoMethodError in Store#display_cart Showing app/views/store/display_cart.rhtml where line #28 raised: undefined method `product''

Hi All, I met a problem when I use rsync to transfer some files to remote server. Why does my transfer fail with something like the following error? rsync: mkstemp "/Instrument/A0003237.agilent.com/.Instrument.mdb.3lGdSl" (in wcss) failed: No such file or directory (2) rsync error: some files could not be transferred (code 23) at /home/lapo/packaging/tmp/rsync-2.6.6/main.c(791)

Can someone point me to some good ideas about managing Rails development - like what would be a good way to document all the models and controllers and methods that might result if several people are prototyping on different parts of a system, and what might be a good structure for pushing back code into SVN as scaffolds are turned into real projects - that sort of thing. I''m

This is a reminder. Please distribute this email. Data on both agile and plan-driven projects are welcome. To Whom It May Concern, My name is Donald Buresh, and I am a Ph.D. student at Northcentral University located in Prescott Valley, Arizona. The reason that I am writing to you is because I would like you to participate in an internet survey for my dissertation. The topic of my

Hi there, I am a newbie and interested in learning Ruby on Rails. I see there are 2 books out there: Ruby for Rails Ruby techniques for Rails developers David A. Black and Agile Web Development with Rails : A Pragmatic Guide (Pragmatic Programmers) Dave Thomas, David Heinemeier Hansson, Andreas Schwarz, and Thomas Fuchs Which one should I get? "Agile Web Development with Rails"

For expats from other languages, what''s the next best step after the Agile Web Dev book: Rails Recipes or Ruby for Rails? Thanks, -- Austin -- Posted via http://www.ruby-forum.com/.

I just wanted to announce my latest plugin: LegacyInterop The 5 second video, minus the video, looks like this: $ ./script/plugin install svn://lirp.rubyforge.org/var/svn/lirp/trunk/legacy_interop $ echo LegacyInterop.act_as_dotnet >> config/environment.rb Done! Agile! Pragmatic! The plugin includes support for a large number of legacy systems, all using the "act_as" pattern.

anyone can explain me why in the Agile Depot Tutorial application they use i.product_id to find if a product already exist in the cart, because the cart contains items, each of them references a product. I tried i.product_id like in the tutorial and i.product.i all of these 2 notation works , but i find the second seems more clean??? isn''t it. Any explanation will be fine Regards

I am following the instructions on Agile Web Development with Rails book "Iteratio E1: Capturing an Order" section. When I run the migrations I get the following error. rake db:migrate (in /Users/balaparanj/work/depot) -- execute("alter table line_items \n add constraint fk_line_item_products \n foreign key (product_id) references products(id)") rake