search for: 0.235

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2011 Sep 27
1
binomial logistic regression question
Dear subscribers, I am looking for a function which would allow me to model the dependent variable as the number of successes in a series of Bernoulli trials. My data looks like this ID TRIALS SUCCESSESS INDEP1 INDEP2 INDEP3 1 4444 0 0.273 0.055 0.156 2 98170 74 0.123 0.456 0.789 3 145486 30 0.124
2009 Dec 04
3
Combinations and joint probabilities
  Dear R helpers   Suppose I have two sets of ranges (interest rates) as   Range 1 : (7 – 7.50, 7.50 – 8.50, 8.50 – 10.00) with respective probabilities 0.42, 0.22 and 0.36.     Range II : (11-12, 12-14, 14-21) with respective probabilities 0.14, 0.56 and 0.30 respectively.     My problem is to form the combinations of these ranges in a decreasing order of joint probabilities. It is assumed that
2007 May 31
1
plotting variable sections of hourly time series data using plot.zoo
Dear list, I have to look examine hourly time - series and would like to plot variable section of them using plot.zoo. Hourly time series data which looks like this: YYYY MM DD HH P-uk P-kor P-SME EPOT EREA RO R1 R2 RGES S-SNO SI SSM SUZ SLZ 2003 1 1 1 0.385 0.456 0.021 0.000 0.000 0.000 0.013 0.223 0.235 0.01 0.38
2008 Mar 25
1
Subset of matrix
Dear R users I have a big matrix like 6021 1188 790 290 1174 1015 1990 6613 6288 100714 6021 1 0.658 0.688 0.474 0.262 0.163 0.137 0.32 0.252 0.206 1188 0.658 1 0.917 0.245 0.331 0.122 0.148 0.194 0.168 0.171 790 0.688 0.917 1 0.243 0.31 0.122 0.15 0.19 0.171 0.174 290 0.474
2008 Oct 26
0
LMER quasibinomial
Hi, a while ago I posted a question regarding the use of alternative models, including a quasibinomial mixed-effects model (see Results 1). I rerun the exact same model yesterday using R 2.7.2 and lme4_0.999375-26 (see Results 2) and today using R 2.7.2 and lme4_0.999375-27 (see Results 3). While the coefficient estimates are basically the same in all three regressions, the estimated standard
2012 Jul 02
1
How to get prediction for a variable in WinBUGS?
Dear all,I am a new user of WinBUGS and need your help. After running the following code, I got parameters of beta0 through beta4 (stats, density), but I don't know how to get the prediction of the last value of h, the variable I set to NA and want to model it using the following code.Does anyone can given me a hint? Any advice would be greatly appreciated.Best
2009 Aug 11
3
loadings function (PR#13886)
Full_Name: Mike Ulrich Version: 2.9 OS: Mac OSX Submission from: (NULL) (69.169.178.34) The help documentation for loadings() lists more then one parameter. The function call only expects one parameter. The digits, cutoff, and sort parameters are not used in the function. ## S3 method for class 'loadings': print(x, digits = 3, cutoff = 0.1, sort = FALSE, ...) ## S3 method for class
2009 Feb 23
1
why results from regression tree (rpart) are totally inconsistent with ordinary regression
Hi, In my analysis of impacts of insecticide-treated bednets on malaria, I look at the relationship between malaria incidence and mosquito behaviors. The condensed data set is copied here. Ordinary regression (lm) shows that Incidence was negatively related to Mortality. This makes sense because the latter reflected the strength of killing mosquitoes by insecticide-treated nets. Since the
2013 Jan 16
1
Mean calculation by two variables
Hello All, I have a data frame (dput information below) with food item weight for fish species. I need to calculate the Mean proportion by weight of each food item for each specie, as show in solution data frame (dput information below). I use the ddply function (plyr package) in two steps. First calculate the proportion of weight for each individual: step1 = ddply (example, .(ID), transform,
2018 Sep 18
2
Migration samba 3 to 4
Hello, I realize again test by resuming all 0 with the following configuration and I arrive at the same result. -------------------- smb.conf [global]     netbios name = svdom     server string = Gestionnaire de domaine     workgroup = dom.domain     hosts allow = 192.168.15. 192.168.6. 10.0.7.     security = user     domain master = yes     domain logons = yes     prefered master =
2009 Mar 31
3
Factor Analysis Output from R and SAS
Dear Users, I ran factor analysis using R and SAS. However, I had different outputs from R and SAS. Why they provide different outputs? Especially, the factor loadings are different. I did real dataset(n=264), however, I had an extremely different from R and SAS. Why this things happened? Which software is correct on? Thanks in advance, - TY #R code with example data # A little
2009 Jul 28
4
How to do poisson distribution test like this?
Dear R-listers, I want to reperfrom a poisson distribution test that presented in a recent-published biological research paper (Plant Physiology 2008, vol 148, pp. 1189-1200). That test is about the occurrence number of a kind of gene in separate chromosomes. For instance: The observed gene number in chromosome A is 36. The expected gene number in chromosome A is 30. Then, the authors got a
2012 Aug 07
2
Passing arguments to a function within a function ...
Hallo Everybody How do you specify arguments for a function used within another function? Here is my problem: I am reconstructing a calculator for the burden of disease due to air pollution from publications and tools published by the WHO. The calculations make use of published dose-response relationships for particular health end-points. This is then applied to populations with known or
2008 Jan 28
0
(no subject)
Hi all I am trying to generate a normal unbalanced data to estimate the coefficients of LM, LMM, GLM, and GLMM and their standard errors. Also, I am trying to estimate the variance components and their standard errors. Further, I am trying to use the likelihood ratio test to test H0: sigma^2_b = 0 (random effects variance component), and the t-test to test H0:mu=0 (intercept of the model Yij = mu
2018 Sep 18
0
Migration samba 3 to 4
On Tue, 18 Sep 2018 11:30:04 +0200 Philippe Maladjian via samba <samba at lists.samba.org> wrote: > Hello, > > I realize again test by resuming all 0 with the following > configuration and I arrive at the same result. > > -------------------- smb.conf > > [global] >     netbios name = svdom >     server string = Gestionnaire de domaine >     workgroup
2004 Jul 30
0
P-value from the joint cumulative distribution of an n-dimensional order statistic
Hello, I want to compute the P-value from the joint cumulative distribution of an n-dimensional order statistic in R, using the formula found on http://cmgm.stanford.edu/%7Ekimlab/multiplespecies/Supplement/methods_network.html My data consists of three different techniques (G2D, POCUS and RANDOM), and each has associated with it a number of rankings (integer between 0 and 1000), like for
2005 Apr 21
0
colldiag
Hello, could anyone explain what am I doing wrong. When I use colldiag function from package perturb I get different Variance Decomposition Proportions matrix in R than in SAS, although the eigenvalues and indexes are the same. Thanks for your attention. Results: in R: eigen(cor(indep2)) $values [1] 4.197131e+00 6.674837e-01 9.462858e-02 4.070314e-02 5.323022e-05 colldiag(indep2,c=T)
2012 Jun 04
0
Negative variance with lavaan in a multigroup analysis.
Hi list members, I saw a couple lavaan posts here so I think I?m sending this to the correct list. I am trying to run a multigroup analysis with lavaan in order to compare behavioural correlations across two populations. I?m following the method suggested in the paper by Dingemanse et al. (2010) in Behavioural Ecology. In one of the groups, lavaan returns negative variance for one path and I?m
2007 Jun 20
0
Multi-variate Probit model using Bayesm
Hello, I have built a multi-variate probit model using the package "bayesm", which requires that the X data is constructed using the function "CreateX". I've gone through the documentation and run my model, but wanted to be sure about my interpretation of the results for the coefficients - beta. Steps: 1) I have 5 choices for the dependent variable Y, so p=5 2) I have 8
2007 Jun 21
0
Multi-variate Probit model using Bayesm in R
Hello, I have built a multi-variate probit model using the package "bayesm", which requires that the X data is constructed using the function "CreateX". I've gone through the documentation and run my model, but wanted to be sure about my interpretation of the results for the coefficients - beta. Steps: 1) I have 5 choices for the dependent variable Y, so p=5 2) I have 8