-----BEGIN PGP SIGNED MESSAGE----- Hash: SHA1 Hi everyone, Any bioinformatics people in the house? - Jason -----BEGIN PGP SIGNATURE----- Version: PGP 8.1 iQA/AwUBQfAko1UyB+ajXkCLEQJBRQCg2NaMOVriGCRSQrZn+lL9W/NfZA0AoKGP 5ZsxXyKR4b9ISP+G0gcQcnqz =w34v -----END PGP SIGNATURE-----
Not as such. My girlfriend is a biologist though, so I often code quick hacks to help her and her coworkers through some lengthy calcs. I haven''t done any genetic code (other than my DNA :), more like demographics and paleoantrhopology. Can I be of any help anyway? (I wanted to be a bioinformatic when I entered the University, because biology used to be the subject matter I got the best marks) Victor Jason Hoffman wrote:> Hi everyone, > > Any bioinformatics people in the house? > > - Jason >_______________________________________________ Rails mailing list Rails-1W37MKcQCpIf0INCOvqR/iCwEArCW2h5@public.gmane.org http://lists.rubyonrails.org/mailman/listinfo/rails
Does anyone have a datepicker/calendar helper that they can share?
Jason Hoffman wrote:>Any bioinformatics people in the house? > >Indeed. What''s on your mind?
On Thu, 20 Jan 2005 13:37:39 -0800, Jason Hoffman <jason-xKtDo/uLHBtl57MIdRCFDg@public.gmane.org> wrote:> -----BEGIN PGP SIGNED MESSAGE----- > Hash: SHA1 > > Hi everyone, > > Any bioinformatics people in the house?No, but I''m interested...> - Jason > > -----BEGIN PGP SIGNATURE----- > Version: PGP 8.1 > > iQA/AwUBQfAko1UyB+ajXkCLEQJBRQCg2NaMOVriGCRSQrZn+lL9W/NfZA0AoKGP > 5ZsxXyKR4b9ISP+G0gcQcnqz > =w34v > -----END PGP SIGNATURE----- > > _______________________________________________ > Rails mailing list > Rails-1W37MKcQCpIf0INCOvqR/iCwEArCW2h5@public.gmane.org > http://lists.rubyonrails.org/mailman/listinfo/rails >-- Cheers Koz
Have you had a look at bioruby.org ? On Thu, 20 Jan 2005 13:37:39 -0800, Jason Hoffman <jason-xKtDo/uLHBtl57MIdRCFDg@public.gmane.org> wrote:> -----BEGIN PGP SIGNED MESSAGE----- > Hash: SHA1 > > Hi everyone, > > Any bioinformatics people in the house? > > - Jason > > -----BEGIN PGP SIGNATURE----- > Version: PGP 8.1 > > iQA/AwUBQfAko1UyB+ajXkCLEQJBRQCg2NaMOVriGCRSQrZn+lL9W/NfZA0AoKGP > 5ZsxXyKR4b9ISP+G0gcQcnqz > =w34v > -----END PGP SIGNATURE----- > > _______________________________________________ > Rails mailing list > Rails-1W37MKcQCpIf0INCOvqR/iCwEArCW2h5@public.gmane.org > http://lists.rubyonrails.org/mailman/listinfo/rails >
Steve Longdo wrote:>Have you had a look at bioruby.org ? > >Quite a bit. I approve. You may want to bring this discussion into the ruby-talk mailing list unless you have some Rails specific questions. I bet there''s plenty of people there that would like to know about it.
If you''re looking a DHTM Calendar, IMHO the best is: http://www.dynarch.com/projects/calendar/ On Fri, 21 Jan 2005 09:08:30 +1100, David van den Berg <dvdberg-ee4meeAH724@public.gmane.org> wrote:> Does anyone have a datepicker/calendar helper that they can share? > > _______________________________________________ > Rails mailing list > Rails-1W37MKcQCpIf0INCOvqR/iCwEArCW2h5@public.gmane.org > http://lists.rubyonrails.org/mailman/listinfo/rails >
-----BEGIN PGP SIGNED MESSAGE----- Hash: SHA1 On Jan 20, 2005, at 1:43 PM, victor jalencas wrote:> Not as such. My girlfriend is a biologist though, so I often code > quick hacks to help her and her coworkers through some lengthy calcs. > I haven''t done any genetic code (other than my DNA :), more like > demographics and paleoantrhopology. > Can I be of any help anyway? (I wanted to be a bioinformatic when I > entered the University, because biology used to be the subject matter > I got the best marks) > VictorOn Jan 20, 2005, at 2:24 PM, Trevor Wennblom wrote:> Indeed. What''s on your mind?On Jan 20, 2005, at 2:52 PM, Michael Koziarski wrote:> No, but I''m interested...On Jan 20, 2005, at 3:13 PM, Steve Longdo wrote:> Have you had a look at bioruby.org ?Thank everyone who responded and sorry not getting right back to you yesterday. Yes, I''ve used bioruby classes and have been a user of bioperl and biojava for a while, and what I''ve been loving about bioruby is that even though there''s less classes currently just the example scripts themselves are much more interesting than bioperl. And when you look at web-based frontends to these sorts of things they are usually ugly perl cgi with something like EMBOSS behind it (at least that''s the kind that I''ve found most useful/have made myself). While I run/help run/setup TextDrive, the "real" job is (to be pretentious enough to just grab my email signature) is - -------------------------------------------------------- Jason A. Hoffman, PhD Advanced Techonologies Group Department of Protein Sciences Genomics Institute of the Novartis Research Foundation 10675 John Jay Hopkins Drive San Diego, CA 92121 - -------------------------------------------------------- We''re part of stuff like http://www.jcsg.org/ and a Novartis institute. So I got the domain names biorails.org .com .net, and thought as a first rails project would be to put a front on some bioinformatic stuff and tool around with that ("first" at least for me at least because I''m relatively new to developing in ruby and with rails). Right now it''ll be in my "free time" (and because I want it out in the public domain) but I''m hoping to get things into the lab(s) as well, and chatting a bit about it with friends/colleagues at the san diego supercomputer center and protein database here in La Jolla. So if anyone has any ideas, is interested, want''s to be involved, knows of something similar (because I don''t) please send me an email. Thanks, Jason -----BEGIN PGP SIGNATURE----- Version: PGP 8.1 iQA/AwUBQfFgslUyB+ajXkCLEQLYnACg2zN7WPREcsJxkFAItRFEathkvnUAoJQQ oufT+u/ZvOCkzCJ5S+kHetHb =lDj3 -----END PGP SIGNATURE-----
Hi Jason,> So if anyone has any ideas, is interested, want''s to be involved, knows > of something similar (because I don''t) please send me an email.I''m interested in being involved. We emailed a while ago after a support ticket on textdrive, I''m doing a PhD in Statistics at Iowa State, interested in bioinformatics, and in web development. I don''t know how much I could contribute as I''m pretty busy with school, but if you could keep me in the loop, that''d be great. Thanks, Hadley
I''m very interested in helping you out. I started a similar venture awhile back, but got way to distracted by the real world. You can see what I had here: http://www.bioinfomagic.org In particular, the first (and only) code I wrote was a ruby program to do simple alignments. I had plans to have a multi-stage tutorial eventually migrating everything over to use BioRuby. The tutorial is here: http://bioinfomagic.org/article.php?story=20030202032818235 Is this the kind of thing you had in mind? I''d love to help out if so. Anoop On Jan 21, 2005, at 3:06 PM, Jason Hoffman wrote:> Yes, I''ve used bioruby classes and have been a user of bioperl and > biojava for a while, and what I''ve been loving about bioruby is that > even though there''s less classes currently just the example scripts > themselves are much more interesting than bioperl. And when you look at > web-based frontends to these sorts of things they are usually ugly perl > cgi with something like EMBOSS behind it (at least that''s the kind that > I''ve found most useful/have made myself).
...and I apologize for posting that to the whole list. On Jan 29, 2005, at 12:41 PM, Anoop Ranganath wrote:> I''m very interested in helping you out. I started a similar venture > awhile back, but got way to distracted by the real world. You can see > what I had here: