Patrick J Rogers
2010-Jul-14 18:55 UTC
[R] Java Heap Space Error while running kpca command
Hi All,
I'm trying to run a kernel principal component analysis on a corpus with
89769 text documents. I'm using the kpca command from the kernlab package.
Here is the code:
output<-kpca(text, kernel=worddot(type="spectrum", length=1))
The problem is that when I run the kpca, it bails after only a few minutes,
generating the following error:
Error in
.jcall(.jnew("opennlp/maxent/io/SuffixSensitiveGISModelReader", :
java.lang.OutOfMemoryError: Java heap space
The openNLP package is a dependency for the kernlab package.
output<-kpca(text, kernel=worddot(type="spectrum", length=1))
I appreciate any help anyone can give!
--
Patrick Rogers